RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 MARC2Q969Z3 335 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 SIPA1Q96FS4 1042 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 FRMD6Q96NE9 622 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 KATNAL1Q9BW62 490 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 CEP41Q9BYV8 373 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 NOL11Q9H8H0 719 aaKnown RBP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 RAB20Q9NX57 234 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 AP4E1Q9UPM8 1137 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 POLR3HQ9Y535 204 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 CRB1P82279 1406 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 LMTK3Q96Q04 1460 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 FAM221BA6H8Z2 402 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 hCG_1984214I3L0E3 225 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 NFIBO00712 420 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 CFLARO15519 480 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 HRO43593 1189 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 HS6ST1O60243 411 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 NOL4O94818 638 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 RASAL1O95294 804 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 LTA4HP09960 611 aaKnown RBP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 GNSP15586 552 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 RPS9P46781 194 aaKnown RBP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 RGS19P49795 217 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 ATXN3P54252 364 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 ABRQ12979 859 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 KLF10Q13118 480 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 CUL2Q13617 745 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 CYP27C1Q4G0S4 372 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 TOR1AIP1Q5JTV8 583 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 FAM26FQ5R3K3 315 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 CEP68Q76N32 757 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF571Q7Z3V5 609 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 FAM35AQ86V20 835 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 CDYL2Q8N8U2 506 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 Q8N9G6 341 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 ZBTB44Q8NCP5 570 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM35BQ8NCS4 154 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 ZFP90Q8TF47 636 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 STAMQ92783 540 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 TANKQ92844 425 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 KIAA1191Q96A73 305 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 GINS4Q9BRT9 223 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 C1QTNF1Q9BXJ1 281 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 GANQ9H2C0 597 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 SEMA6AQ9H2E6 1030 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 CYP3A43Q9HB55 503 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 SRRDQ9UH36 339 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 PNMA8BQ9ULN7 279 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 ZNRF3Q9ULT6 936 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 GTF2A1LQ9UNN4 478 aa4.15□□□□□ -1.74
NEDD4-201ENST00000338963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.15□□□□□ -1.74
NEDD4-201ENST00000338963 ADAMTS13Q76LX8 1427 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 RHPN2P1A8MT19 583 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 BBIP1A8MTZ0 92 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 A8MU76 341 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ARHGEF33A8MVX0 844 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 MCIDASD6RGH6 385 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ORC5O43913 435 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 HSPA4LO95757 839 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF30P17039 623 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 PPM1FP49593 454 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 PSME3P61289 254 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 GPLD1P80108 840 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 TNK2Q07912 1038 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ATP6AP1Q15904 470 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SLC36A3Q495N2 470 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 NHSL2Q5HYW2 709 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 FAM111BQ6SJ93 734 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CFAP77Q6ZQR2 320 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 DEPDC4Q8N2C3 294 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 METTL4Q8N3J2 472 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 BEND7Q8N7W2 519 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 C3orf58Q8NDZ4 430 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 FBXW5Q969U6 566 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 MUL1Q969V5 352 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 C18orf25Q96B23 403 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 NARS2Q96I59 477 aaKnown RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 FAM84AQ96KN4 292 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 Q96MT0 163 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 QRFPRQ96P65 431 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ALX4Q9H161 411 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 NT5DC2Q9H857 520 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 INTS10Q9NVR2 710 aaKnown RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 RDH8Q9NYR8 311 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 KCNJ14Q9UNX9 436 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 PCDHGB6Q9Y5F9 930 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 IQGAP3Q86VI3 1631 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 KIAA1210Q9ULL0 1709 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 UCHL3P15374 230 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 RPL22P35268 128 aaKnown RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SLC1A3P43003 542 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CAPZA1P52907 286 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 WNT7BP56706 349 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 MAT1AQ00266 395 aaKnown RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 C1QBPQ07021 282 aaKnown RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 MAPKAPK3Q16644 382 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 KRBOX4Q5JUW0 171 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SAPCD1Q5SSQ6 148 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CCDC149Q6ZUS6 474 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SPRED1Q7Z699 444 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms