RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 STC1P52823 247 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PFKPQ01813 784 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GRSF1Q12849 480 aaKnown RBP eCLIP14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TDGQ13569 410 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LRRC14Q15048 493 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TYSND1Q2T9J0 566 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PPM1JQ5JR12 505 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 RFLNAQ6ZTI6 216 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GALNT7Q86SF2 657 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SLC41A1Q8IVJ1 513 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PIANPQ8IYJ0 282 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TCP10LQ8TDR4 215 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ISL2Q96A47 359 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 APOPT1Q96IL0 206 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ELMO2Q96JJ3 720 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 C19orf43Q9BQ61 176 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 C12orf65Q9H3J6 166 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 INTS9Q9NV88 658 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CRYL1Q9Y2S2 319 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SLC30A1Q9Y6M5 507 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 C1QTNF3-AMACRE9PGA6 284 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GAPDHSO14556 408 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GPR39O43194 453 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PRAMEF1O95521 474 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SPAM1P38567 509 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MAGEA12P43365 314 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PGGT1BP53609 377 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CAMK2GQ13555 558 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PDE1CQ14123 709 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 USP10Q14694 798 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RBM20Q5T481 1227 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ERAP2Q6P179 960 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FBXL19Q6PCT2 694 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DPPA4Q7L190 304 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TAS2R42Q7RTR8 314 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CBARPQ8N350 705 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GPR26Q8NDV2 337 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ACMSDQ8TDX5 336 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DENND1AQ8TEH3 1009 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PPP1R16AQ96I34 528 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 NDNQ99608 321 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 VPS11Q9H270 941 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 IL26Q9NPH9 171 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PRDM6Q9NQX0 595 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DYRK4Q9NR20 520 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 APPL1Q9UKG1 709 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FAM50BQ9Y247 325 aa14.7□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GLYATL1P3A0A0U1RQE8 302 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SYNCRIPO60506 623 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SRP72O76094 671 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SRFP11831 508 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZNF30P17039 623 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 NTSR1P30989 418 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GMPRP36959 345 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CLCN5P51795 746 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 NEK3P51956 506 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SLC18A1P54219 525 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GNGT1P63211 74 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CACNG1Q06432 222 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RALGDSQ12967 914 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CDHR3Q6ZTQ4 885 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CACUL1Q86Y37 369 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 IL17RCQ8NAC3 791 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 OMDQ99983 421 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ASB8Q9H765 288 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 INTS10Q9NVR2 710 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SLC17A7Q9P2U7 560 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ITM2BQ9Y287 266 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 UBA6A0AVT1 1052 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 LOC730098B7Z3J9 87 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 NDUFS3O75489 264 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 KLF8O95600 359 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TOP3BO95985 862 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ADRB3P13945 408 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GLULP15104 373 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MMP12P39900 470 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CCT5P48643 541 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SPINT3P49223 89 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 WDR4P57081 412 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SATB1Q01826 763 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CHRNA6Q15825 494 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PUS10Q3MIT2 529 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SLC44A4Q53GD3 710 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FAM46CQ5VWP2 391 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SDE2Q6IQ49 451 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RAPH1Q70E73 1250 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TXNDC5Q8NBS9 432 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GDAP1Q8TB36 358 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FAM3CQ92520 227 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TCF12Q99081 682 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PAIP2Q9BPZ3 127 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 IQCGQ9H095 443 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RSPH9Q9H1X1 276 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SLC2A4RGQ9NR83 387 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PKD2L2Q9NZM6 624 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CD84Q9UIB8 345 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 LRRK1Q38SD2 2015 aa14.69□□□□□ -0.06
CDK5RAP3-201ENST00000338399 A0A096LPK6 155 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SHISA7A6NL88 538 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms