RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RBM20Q5T481 1227 aaKnown RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 HHATQ5VTY9 493 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PSAPL1Q6NUJ1 521 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 LVRNQ6Q4G3 990 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 PARS2Q7L3T8 475 aaKnown RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 GALNT7Q86SF2 657 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 MMAAQ8IVH4 418 aaKnown RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 PIANPQ8IYJ0 282 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 HCAR2Q8TDS4 363 aa14.66□□□□□ -0.06
CBX3-201ENST00000337620 EZH1Q92800 747 aaPredicted RBP14.66□□□□□ -0.06
CBX3-201ENST00000337620 A0A096LPK6 155 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 UBA6A0AVT1 1052 aaPredicted RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 GPR39O43194 453 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 NDUFS3O75489 264 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 MPOP05164 745 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 VIPR1P32241 457 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 CLCN5P51795 746 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 SLC12A2P55011 1212 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 GABPB1Q06547 395 aaPredicted RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 TERF2Q15554 542 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 SMAD2Q15796 467 aaKnown RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 C2orf27AQ580R0 203 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 DSG4Q86SJ6 1040 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 RALGPS2Q86X27 583 aaPredicted RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 ISL2Q96A47 359 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 FAM111AQ96PZ2 611 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 OMDQ99983 421 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 IL26Q9NPH9 171 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 TRPV5Q9NQA5 729 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 PSD3Q9NYI0 1048 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 APPL1Q9UKG1 709 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 TLK1Q9UKI8 766 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 PHGDHO43175 533 aaKnown RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 SRP72O76094 671 aaKnown RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 PRAMEF1O95521 474 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 ASMTLO95671 621 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 C2P06681 752 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 STMN1P16949 149 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 CRHR1P34998 444 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 MAGEA12P43365 314 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 KIR2DL1P43626 348 aaPredicted RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 POLD2P49005 469 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 IL9RQ01113 521 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 CACNG1Q06432 222 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 TYSND1Q2T9J0 566 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 GLIPR1L2Q4G1C9 344 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 ERAP2Q6P179 960 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 FBXL19Q6PCT2 694 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 ARRDC3Q96B67 414 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 C8orf33Q9H7E9 229 aaPredicted RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 DYRK4Q9NR20 520 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 INTS10Q9NVR2 710 aaKnown RBP14.65□□□□□ -0.06
CBX3-201ENST00000337620 DCDC2Q9UHG0 476 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 PLLPQ9Y342 182 aa14.65□□□□□ -0.06
CBX3-201ENST00000337620 MYO10Q9HD67 2058 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 GLYATL1P3A0A0U1RQE8 302 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 PLK4O00444 970 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 PFDN6O15212 129 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 NARSO43776 548 aaKnown RBP14.64□□□□□ -0.07
CBX3-201ENST00000337620 EGFP01133 1207 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 C1SP09871 688 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 ITGB7P26010 798 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 SPAM1P38567 509 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 PSMD8P48556 350 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 TTPAP49638 278 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 TAS2R39P59534 338 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 RAB10P61026 200 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 POU4F1Q01851 419 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 ZNF460Q14592 562 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 E2F5Q15329 346 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 IER5LQ5T953 404 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 PTCRAQ6ISU1 281 aaPredicted RBP14.64□□□□□ -0.07
CBX3-201ENST00000337620 RFLNAQ6ZTI6 216 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 CEP97Q8IW35 865 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 GPR26Q8NDV2 337 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 PPP1R16AQ96I34 528 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 CABS1Q96KC9 395 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 TCF12Q99081 682 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 RABEP2Q9H5N1 569 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 ASB8Q9H765 288 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 MKS1Q9NXB0 559 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 VWA7Q9Y334 891 aa14.64□□□□□ -0.07
CBX3-201ENST00000337620 WDR91A4D1P6 747 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 C1QTNF3-AMACRE9PGA6 284 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 SYNCRIPO60506 623 aaKnown RBP14.63□□□□□ -0.07
CBX3-201ENST00000337620 ZNF30P17039 623 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 IRF9Q00978 393 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 TAF1BQ53T94 588 aaPredicted RBP14.63□□□□□ -0.07
CBX3-201ENST00000337620 AARS2Q5JTZ9 985 aaKnown RBP14.63□□□□□ -0.07
CBX3-201ENST00000337620 HECTD2Q5U5R9 776 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 C16orf46Q6P387 395 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 CBARPQ8N350 705 aaPredicted RBP14.63□□□□□ -0.07
CBX3-201ENST00000337620 DNASE1L2Q92874 299 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.63□□□□□ -0.074e-10■■■■■ 86.3
CBX3-201ENST00000337620 C19orf43Q9BQ61 176 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 CD84Q9UIB8 345 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 GRID1Q9ULK0 1009 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 ATG2BQ96BY7 2078 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 F5P12259 2224 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 GAPDHSO14556 408 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms