RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RAB25P57735 213 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 FAM131AQ6UXB0 335 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 Q6ZNX1 250 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 ASCC1Q8N9N2 400 aaKnown RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 UXS1Q8NBZ7 420 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 LEMD2Q8NC56 503 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 HEXDCQ8WVB3 486 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 ESAMQ96AP7 390 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 SLC47A1Q96FL8 570 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 HSFY1Q96LI6 401 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 SMURF2Q9HAU4 748 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 KRT84Q9NSB2 600 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 TMEM9Q9P0T7 183 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 PADI4Q9UM07 663 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 SLC27A5Q9Y2P5 690 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 A0A087X1B8 175 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 CCL15-CCL14A0A0B4J2E2 113 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 OR6C70A6NIJ9 312 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 ZBTB24O43167 697 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 IGFBP5P24593 272 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 PRIM2P49643 509 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 BST2Q10589 180 aaKnown RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 FSCN1Q16658 493 aaKnown RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 CCL15Q16663 113 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 KLHL12Q53G59 568 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 PCID2Q5JVF3 399 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 EEF1DP3Q658K8 133 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 ZCCHC8Q6NZY4 707 aaKnown RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 LRRC49Q8IUZ0 686 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 CLHC1Q8NHS4 586 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 FDXACB1Q9BRP7 624 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 RHOBTB2Q9BYZ6 727 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 C12orf4Q9NQ89 552 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 PCDHGB5Q9Y5G0 923 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 FAM189A1O60320 539 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 FMO4P31512 558 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 PIK3CGP48736 1102 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 GPR158Q5T848 1215 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF773Q6PK81 442 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF621Q6ZSS3 439 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 CPNE9Q8IYJ1 553 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ITPKCQ96DU7 683 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF717Q9BY31 904 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 TIMM13Q9Y5L4 95 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 C7orf72A4D263 438 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 B4GALT5O43286 388 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 PEX10O60683 326 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 VARSP26640 1264 aaKnown RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 SOAT1P35610 550 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 HPCAL1P37235 193 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 DAG1Q14118 895 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 NCF4Q15080 339 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 OTOP3Q7RTS5 596 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF567Q8N184 647 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 DEPDC4Q8N2C3 294 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 TRPV3Q8NET8 790 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 TMBIM1Q969X1 311 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 TP63Q9H3D4 680 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF624Q9P2J8 865 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 DLX3O60479 287 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 KRT6AP02538 564 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 HUNKP57058 714 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 NPTX1Q15818 432 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 PPP1R26Q5T8A7 1209 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ATAD3BQ5T9A4 648 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 PLEKHM3Q6ZWE6 761 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 LILRA2Q8N149 483 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 PIK3C3Q8NEB9 887 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 TWIST2Q8WVJ9 160 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 FAM193BQ96PV7 902 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ELOVL6Q9H5J4 265 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 TRIM45Q9H8W5 580 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 SIAEQ9HAT2 523 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 PAQR5Q9NXK6 330 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 CRNNQ9UBG3 495 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 NUMBLQ9Y6R0 609 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 H3BN98 237 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 PIP5K1BO14986 540 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 VPS26AO75436 327 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 SNX4O95219 450 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 COL6A2P12110 1019 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ICAM3P32942 547 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 TAF1CQ15572 869 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 INO80DQ53TQ3 878 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 CYP4V2Q6ZWL3 525 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 KRT73Q86Y46 540 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ABI1Q8IZP0 508 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 CMASQ8NFW8 434 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-201ENST00000337299 SPATA22Q8NHS9 363 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 GRPEL2Q8TAA5 225 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 PPP1R13LQ8WUF5 828 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 SYTL2Q9HCH5 934 aa13.22□□□□□ -0.29
COL2A1-201ENST00000337299 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 FAM240BA0A1B0GVZ2 78 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 PRORSD1PA6NEY8 169 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 SNTNA6NMZ2 147 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 BTBD19C9JJ37 291 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 I3L521 148 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms