RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZYG11AQ6WRX3 759 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 TMEM86AQ8N2M4 240 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ZNF276Q8N554 614 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 OR4L1Q8NH43 312 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 C19orf60Q96EN9 201 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 LINGO1Q96FE5 620 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 TSSK3Q96PN8 268 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 VAT1Q99536 393 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ZBTB18Q99592 522 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 RTKNQ9BST9 563 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ACTR8Q9H981 624 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 PLAC1Q9HBJ0 212 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 TLR8Q9NR97 1041 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 TBC1D13Q9NVG8 400 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 UBR3Q6ZT12 1888 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 AZIN1O14977 448 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 MATN3O15232 486 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 AOC1P19801 751 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 FASP25445 335 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ALDH4A1P30038 563 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 AXLP30530 894 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 MC4RP32245 332 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 SLC11A2P49281 568 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 BFSP2Q13515 415 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 FRG1Q14331 258 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 FAM187BQ17R55 369 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 NADK2Q4G0N4 442 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 RNF219Q5W0B1 726 aaPredicted RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 SPESP1Q6UW49 350 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 EPGNQ6UW88 154 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ATG14Q6ZNE5 492 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ZNF366Q8N895 744 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 TWIST2Q8WVJ9 160 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 IGSF8Q969P0 613 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ZBED2Q9BTP6 218 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 DRC3Q9H069 523 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ASB8Q9H765 288 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 AKTIPQ9H8T0 292 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 STK39Q9UEW8 545 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 F8W8V4 182 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 G3V2L1 256 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 HSPA7P48741 367 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 FKBP1BP68106 108 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 VAC14Q08AM6 782 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 CRHR2Q13324 411 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 DYNC1I2Q13409 638 aaKnown RBP8.21□□□□□ -1.09
HPS4-201ENST00000336873 GRB7Q14451 532 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 NFE2Q16621 373 aaPredicted RBP8.21□□□□□ -1.09
HPS4-201ENST00000336873 C18orf21Q32NC0 220 aaPredicted RBP8.21□□□□□ -1.09
HPS4-201ENST00000336873 UAP1L1Q3KQV9 507 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 VARS2Q5ST30 1063 aaKnown RBP8.21□□□□□ -1.09
HPS4-201ENST00000336873 REP15Q6BDI9 236 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 GALNT5Q7Z7M9 940 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 SETD3Q86TU7 594 aaPredicted RBP8.21□□□□□ -1.09
HPS4-201ENST00000336873 GPSM1Q86YR5 675 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 CENPLQ8N0S6 344 aaPredicted RBP8.21□□□□□ -1.09
HPS4-201ENST00000336873 MYLIPQ8WY64 445 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 ZIC5Q96T25 663 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 SLC25A23Q9BV35 468 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 CLPBQ9H078 707 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 FETUBQ9UGM5 382 aa8.21□□□□□ -1.09
HPS4-201ENST00000336873 ZFP37Q9Y6Q3 630 aaPredicted RBP8.21□□□□□ -1.09
HPS4-201ENST00000336873 SCAMP1O15126 338 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 PSMD3O43242 534 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 NOBOXO60393 691 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 MGEA5O60502 916 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 C1RP00736 705 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 CHRNA1P02708 482 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 HOXD10P28358 340 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 PRDX3P30048 256 aaKnown RBP8.21□□□□□ -1.1
HPS4-201ENST00000336873 RAB27AP51159 221 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 FCGRTP55899 365 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 DAB2P98082 770 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 NIPAL4Q0D2K0 466 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 SIRPB2Q5JXA9 342 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 POTEHQ6S545 545 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 RASAL3Q86YV0 1011 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 APLFQ8IW19 511 aaPredicted RBP8.21□□□□□ -1.1
HPS4-201ENST00000336873 MFN1Q8IWA4 741 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 LZTR1Q8N653 840 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 DRAXINQ8NBI3 349 aaPredicted RBP8.21□□□□□ -1.1
HPS4-201ENST00000336873 BPIFB6Q8NFQ5 453 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 TMIGD2Q96BF3 282 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 ATG10Q9H0Y0 220 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 POLR1BQ9H9Y6 1135 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 GID8Q9NWU2 228 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 UBA2Q9UBT2 640 aaPredicted RBP8.21□□□□□ -1.1
HPS4-201ENST00000336873 DHRS12A0PJE2 317 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 KRT87PA6NCN2 255 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 CAPN14A8MX76 684 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 TOR1BO14657 336 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 HS6ST1O60243 411 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 SNNO75324 88 aaPredicted RBP8.21□□□□□ -1.1
HPS4-201ENST00000336873 DIRAS1O95057 198 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 TNFAIP8O95379 198 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 CCND3P30281 292 aaPredicted RBP8.21□□□□□ -1.1
HPS4-201ENST00000336873 CDKN2DP55273 166 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 PURAQ00577 322 aaKnown RBP8.21□□□□□ -1.1
HPS4-201ENST00000336873 UBXN11Q5T124 520 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 TSTD2Q5T7W7 516 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms