RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 GNSP15586 552 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 SPAM1P38567 509 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 ARL4CP56559 192 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 DCDC1P59894 354 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 RACK1P63244 317 aaKnown RBP14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 DHX9Q08211 1270 aaKnown RBP14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 INPP5AQ14642 412 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 HIF1AQ16665 826 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 BBS9Q3SYG4 887 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 MSS51Q4VC12 460 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 ZDHHC20Q5W0Z9 365 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 RAET1GQ6H3X3 334 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 ESRP1Q6NXG1 681 aaKnown RBP14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 PNCKQ6P2M8 343 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 ZDHHC24Q6UX98 284 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 KDM7AQ6ZMT4 941 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 GCNT7Q6ZNI0 430 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 SYT12Q8IV01 421 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 PDIK1LQ8N165 341 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 TMEM145Q8NBT3 493 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 C1orf216Q8TAB5 229 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 FBXO25Q8TCJ0 367 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 IFT81Q8WYA0 676 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 BMFQ96LC9 184 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 PLEKHG4BQ96PX9 1271 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 SPATA16Q9BXB7 569 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 CDH19Q9H159 772 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 ARRDC1-AS1Q9H2J1 176 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 SEMA4AQ9H3S1 761 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 RRAGDQ9NQL2 400 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 NLE1Q9NVX2 485 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 SAMD15Q9P1V8 674 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 SLC2A6Q9UGQ3 507 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 RAPGEFL1Q9UHV5 662 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 FKBPLQ9UIM3 349 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 A0A1B0GTW7 788 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 A0A1W2PR77 199 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 POM121BA6NF01 834 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 K7ESM1 405 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 BANF1O75531 89 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 TSHRP16473 764 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 CD38P28907 300 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 HADHAP40939 763 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 DPP6P42658 865 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 GPR1P46091 355 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 DPTQ07507 201 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 SKIDA1Q1XH10 827 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 HENMT1Q5T8I9 393 aaKnown RBP14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 PEAR1Q5VY43 1037 aaPredicted RBP14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 FAM151BQ6UXP7 276 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 KYAT3Q6YP21 454 aaKnown RBP14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 NLRP9Q7RTR0 991 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 PTAR1Q7Z6K3 402 aaPredicted RBP14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 ABI3BPQ7Z7G0 1075 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 NLRP8Q86W28 1048 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 AGGF1Q8N302 714 aaeCLIP14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 PTCD2Q8WV60 388 aaKnown RBP14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 SIGLEC10Q96LC7 697 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 ZNF778Q96MU6 729 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 AGAP2Q99490 1192 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 KIFC1Q9BW19 673 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 MRM3Q9HC36 420 aaKnown RBP14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 IL26Q9NPH9 171 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 NFKBIL1Q9UBC1 381 aaPredicted RBP14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 SUSD2Q9UGT4 822 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 SOX13Q9UN79 622 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 PCDHGA5Q9Y5G8 931 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 MAD1L1Q9Y6D9 718 aa14.02□□□□□ -0.17
APOBEC3B-202ENST00000335760 GLYATL1P3A0A0U1RQE8 302 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 MAGEB16A2A368 324 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 A6NNZ2 444 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 PRR5-ARHGAP8B1AHC4 643 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 LMNAP02545 664 aaKnown RBP14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 WNT1P04628 370 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 PYGLP06737 847 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 NMBRP28336 390 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 HOXD12P35452 270 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 CSNK1EP49674 416 aaKnown RBP14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 AFF3P51826 1226 aaKnown RBP14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 PFN3P60673 137 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 CHRNA6Q15825 494 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 HP1BP3Q5SSJ5 553 aaPredicted RBP14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 CES3Q6UWW8 571 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 LAYNQ6UX15 382 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 Q6ZSR6 202 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 IFT20Q8IY31 132 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 TRAM1L1Q8N609 369 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 MFSD2AQ8NA29 543 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 OR13H1Q8NG92 308 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 OR13J1Q8NGT2 312 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 STAMBPL1Q96FJ0 436 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 KLHDC7BQ96G42 594 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 C19orf43Q9BQ61 176 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 APOOQ9BUR5 198 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 SUDS3Q9H7L9 328 aaPredicted RBP14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 GDF3Q9NR23 364 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 ZDHHC18Q9NUE0 388 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 GMEB2Q9UKD1 530 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 RIMKLBQ9ULI2 386 aa14.01□□□□□ -0.17
APOBEC3B-202ENST00000335760 OR1A2Q9Y585 309 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms