RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 ARNTP27540 789 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 DPTQ07507 201 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 TCF15Q12870 199 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 LAMB3Q13751 1172 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 ANKRD20A4Q4UJ75 823 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 HENMT1Q5T8I9 393 aaKnown RBP17.44■□□□□ 0.38
CHGA-202ENST00000334654 PMS2CLQ68D20 193 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 CASC4Q6P4E1 433 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 ZNF765Q7L2R6 523 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 NLRP9Q7RTR0 991 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 NLRP8Q86W28 1048 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 ANKMY2Q8IV38 441 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 GSPT2Q8IYD1 628 aaKnown RBP17.44■□□□□ 0.38
CHGA-202ENST00000334654 FBXO36Q8NEA4 188 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 PRSS33Q8NF86 280 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 CDKN2AIPNLQ96HQ2 116 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 ZC3H10Q96K80 434 aaKnown RBP17.44■□□□□ 0.38
CHGA-202ENST00000334654 TBATAQ96M53 351 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 LENG8Q96PV6 779 aaPredicted RBP17.44■□□□□ 0.38
CHGA-202ENST00000334654 AGAP2Q99490 1192 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 PARD6BQ9BYG5 372 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 SAYSD1Q9NPB0 183 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 FKBPLQ9UIM3 349 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 CHMP2BQ9UQN3 213 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 PKP3Q9Y446 797 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 MAD1L1Q9Y6D9 718 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 VPS13AQ96RL7 3174 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 A0A1W2PPC4 97 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 SOD1P00441 154 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 CA5AP35218 305 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 PTGER3P43115 390 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 DCDC1P59894 354 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 SGCGQ13326 291 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 PEX6Q13608 980 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 SKIDA1Q1XH10 827 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 SPDYCQ5MJ68 293 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 KDM7AQ6ZMT4 941 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 RELL1Q8IUW5 271 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 ZBED8Q8IZ13 594 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 PLA2G15Q8NCC3 412 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 C1orf216Q8TAB5 229 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 NUS1Q96E22 293 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 HSPA12BQ96MM6 686 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 PLEKHG4BQ96PX9 1271 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 RIOK2Q9BVS4 552 aaKnown RBP17.44■□□□□ 0.38
CHGA-202ENST00000334654 FAM83DQ9H4H8 585 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 SUDS3Q9H7L9 328 aaPredicted RBP17.44■□□□□ 0.38
CHGA-202ENST00000334654 FZD3Q9NPG1 666 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 SAMD15Q9P1V8 674 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 MTRF1LQ9UGC7 380 aaKnown RBP17.44■□□□□ 0.38
CHGA-202ENST00000334654 RAB21Q9UL25 225 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 KNL1Q8NG31 2342 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 K7ESM1 405 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 CTIFO43310 598 aaKnown RBP17.43■□□□□ 0.38
CHGA-202ENST00000334654 USP1O94782 785 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 PGAM1P18669 254 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 MAGEA4P43358 317 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 ARCN1P48444 511 aaKnown RBP17.43■□□□□ 0.38
CHGA-202ENST00000334654 PTPN5P54829 565 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 LRRC14Q15048 493 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 ELF2Q15723 593 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 SETMARQ53H47 684 aaPredicted RBP17.43■□□□□ 0.38
CHGA-202ENST00000334654 STEAP4Q687X5 459 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 UNC5AQ6ZN44 842 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 LPCAT2Q7L5N7 544 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 C11orf74Q86VG3 221 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 CCDC25Q86WR0 208 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 TMEM145Q8NBT3 493 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 DTX3LQ8TDB6 740 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 DNASE2BQ8WZ79 361 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 FOXJ1Q92949 421 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 HDAC10Q969S8 669 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 NAT9Q9BTE0 207 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 TXLNGYQ9BZA5 131 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 CDH19Q9H159 772 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 KCTD5Q9NXV2 234 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 TMPRSS11EQ9UL52 423 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 RPS6KL1Q9Y6S9 549 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 FAM169AQ9Y6X4 670 aa17.43■□□□□ 0.38
CHGA-202ENST00000334654 MUC6Q6W4X9 2439 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 HNRNPA2B1P22626 353 aaKnown RBP17.42■□□□□ 0.38
CHGA-202ENST00000334654 CD27P26842 260 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 MAOBP27338 520 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 IGFALSP35858 605 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 SPAM1P38567 509 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 HADHAP40939 763 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 GPX6P59796 221 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 IRF4Q15306 451 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 UBAP2Q5T6F2 1119 aaKnown RBP17.42■□□□□ 0.38
CHGA-202ENST00000334654 ALS2CLQ60I27 953 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 CCNJLQ8IV13 435 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 DENND6BQ8NEG7 585 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 ZNF669Q96BR6 464 aaPredicted RBP17.42■□□□□ 0.38
CHGA-202ENST00000334654 AP2M1Q96CW1 435 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 BMFQ96LC9 184 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 C9orf72Q96LT7 481 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 RAD18Q9NS91 495 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 ZC3H7BQ9UGR2 993 aaKnown RBP17.42■□□□□ 0.38
CHGA-202ENST00000334654 EIF2B4Q9UI10 523 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms