RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ZNF284Q2VY69 593 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 TMEM259Q4ZIN3 620 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 PSAPL1Q6NUJ1 521 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 PTAR1Q7Z6K3 402 aaPredicted RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 TRIM74Q86UV6 250 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 DENND6AQ8IWF6 608 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 HCAR2Q8TDS4 363 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 PTCD2Q8WV60 388 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 CDKN2AIPNLQ96HQ2 116 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 BTBD1Q9H0C5 482 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 FBRSQ9HAH7 460 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 MTRF1LQ9UGC7 380 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 PSAT1Q9Y617 370 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 ZNF318Q5VUA4 2279 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 HEATR9A2RTY3 570 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 CCDC151A5D8V7 595 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 LAMTOR5O43504 91 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 MTX2O75431 263 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 FAM155BO75949 473 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 SEMA4FO95754 770 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 GOT2P00505 430 aaKnown RBP16.46■□□□□ 0.23
SHOX-201ENST00000334060 PGAM1P18669 254 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 LPOP22079 712 aaPredicted RBP16.46■□□□□ 0.23
SHOX-201ENST00000334060 SPINT3P49223 89 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 CLDN2P57739 230 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 ARHGEF7Q14155 803 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 DNAJC21Q5F1R6 531 aaKnown RBP16.46■□□□□ 0.23
SHOX-201ENST00000334060 USP30Q70CQ3 517 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 SLC41A1Q8IVJ1 513 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 TMEFF1Q8IYR6 380 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 CXorf40AQ8TE69 158 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 RANBP9Q96S59 729 aa16.46■□□□□ 0.23
SHOX-201ENST00000334060 RIOK2Q9BVS4 552 aaKnown RBP16.46■□□□□ 0.23
SHOX-201ENST00000334060 FAM237BA0A1B0GVD1 139 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 TCRBV9S1A1TA0A576 114 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 FOXO6A8MYZ6 492 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 C10orf142B7Z368 130 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 STX7O15400 261 aaKnown RBP16.46■□□□□ 0.22
SHOX-201ENST00000334060 FSBPO95073 299 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 IGLV3-19P01714 112 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 PMS2P54278 862 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 ZBTB16Q05516 673 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 CHRNA6Q15825 494 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 WSCD2Q2TBF2 565 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 KHDC1Q4VXA5 237 aaKnown RBP16.46■□□□□ 0.22
SHOX-201ENST00000334060 TPRG1LQ5T0D9 272 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 ICE2Q659A1 982 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 BIRC7Q96CA5 298 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 ORAI3Q9BRQ5 295 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 VPS37BQ9H9H4 285 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 NLE1Q9NVX2 485 aaPredicted RBP16.46■□□□□ 0.22
SHOX-201ENST00000334060 SAMD15Q9P1V8 674 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 FZD4Q9ULV1 537 aa16.46■□□□□ 0.22
SHOX-201ENST00000334060 ALDH1A2O94788 518 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 CYP2A6P11509 494 aaPredicted RBP16.45■□□□□ 0.22
SHOX-201ENST00000334060 OAS2P29728 719 aaKnown RBP16.45■□□□□ 0.22
SHOX-201ENST00000334060 CD6P30203 668 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 MC4RP32245 332 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 HSD17B3P37058 310 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 PTGER3P43115 390 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 SLC29A2Q14542 456 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 E2F5Q15329 346 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 ATP13A5Q4VNC0 1218 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 HSP90AA5PQ58FG0 334 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 BEND6Q5SZJ8 279 aaPredicted RBP16.45■□□□□ 0.22
SHOX-201ENST00000334060 STEAP4Q687X5 459 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 C3orf62Q6ZUJ4 267 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 FBF1Q8TES7 1133 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 DTD2Q96FN9 168 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 KLF6Q99612 283 aaPredicted RBP16.45■□□□□ 0.22
SHOX-201ENST00000334060 PCYT1BQ9Y5K3 369 aaPredicted RBP16.45■□□□□ 0.22
SHOX-201ENST00000334060 PLXNA2O75051 1894 aa16.45■□□□□ 0.22
SHOX-201ENST00000334060 ATXN2Q99700 1313 aaKnown RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 SMAPO00193 183 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 INPP4BO15327 924 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 RIPK2O43353 540 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 HRO43593 1189 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 AP1G1O43747 822 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 LZTS3O60299 673 aaPredicted RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 PAPSS2O95340 614 aaPredicted RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 CRTAMO95727 393 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 PCCBP05166 539 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 MAGEA9P43362 315 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 MPP1Q00013 466 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 ACVR1Q04771 509 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 ELP6Q0PNE2 266 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 CTBP1Q13363 440 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 BMP8AQ7Z5Y6 402 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 CAMKK1Q8N5S9 505 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 ACVR1CQ8NER5 493 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 OR6P1Q8NGX9 317 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 UBLCP1Q8WVY7 318 aaPredicted RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 LENG8Q96PV6 779 aaPredicted RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 LGR4Q9BXB1 951 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 ACBD3Q9H3P7 528 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 NCKAP1Q9Y2A7 1128 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 PLXNB3Q9ULL4 1909 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 ZNF106Q9H2Y7 1883 aaKnown RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 POM121BA6NF01 834 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms