RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 BRMS1LQ5PSV4 323 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TIGD7Q6NT04 549 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 METTL23Q86XA0 190 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 SLC15A3Q8IY34 581 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 OFCC1Q8IZS5 231 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ZNF786Q8N393 782 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 LZTR1Q8N653 840 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TWIST2Q8WVJ9 160 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TEX37Q96LM6 180 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 SMIM14Q96QK8 99 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 VPS45Q9NRW7 570 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 EBF1Q9UH73 591 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 IKZF3Q9UKT9 509 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TMCO1Q9UM00 188 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 PATJQ8NI35 1801 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 GREB1Q4ZG55 1949 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TNFRSF10BO14763 440 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 LDB2O43679 373 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 CD1DP15813 335 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TM4SF4P48230 202 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 EMP3P54852 163 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 HERVK_113P63132 956 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 MGAT3Q09327 533 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 SLC14A2Q15849 920 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 DDR2Q16832 855 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 RABL3Q5HYI8 236 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 MARC1Q5VT66 337 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 SLC22A9Q8IVM8 553 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 CCDC117Q8IWD4 279 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 DCBLD1Q8N8Z6 715 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 RIN3Q8TB24 985 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 DNAJB14Q8TBM8 379 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 CALML6Q8TD86 181 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ESAMQ96AP7 390 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TUBGCP3Q96CW5 907 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TSPAN17Q96FV3 270 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 FBXL20Q96IG2 436 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 UHRF1Q96T88 793 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ERVK-6Q9BXR3 956 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ATP13A1Q9HD20 1204 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 SEMA4BQ9NPR2 832 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 PNPLA3Q9NST1 481 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ABI2Q9NYB9 513 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 NCF1BA6NI72 391 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 NCF1CA8MVU1 366 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ADAMTS4O75173 837 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 GOT2P00505 430 aaKnown RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 PENKP01210 267 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 MTHFD2P13995 350 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 NCF1P14598 390 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 PRDX3P30048 256 aaKnown RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 CCND3P30281 292 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 CYP2C18P33260 490 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ALDH3B2P48448 385 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 MLLT6P55198 1093 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 PLA2G4EQ3MJ16 856 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 FUT11Q495W5 492 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ERMP1Q7Z2K6 904 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TFAP2CQ92754 450 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 TOP1MTQ969P6 601 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 L3HYPDHQ96EM0 354 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 MYEOVQ96EZ4 313 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 B3GALT6Q96L58 329 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 DCUN1D5Q9BTE7 237 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 SP110Q9HB58 689 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 ARNT2Q9HBZ2 717 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 SLAMF8Q9P0V8 285 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 A0A0J9YVX5 310 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 DHRS12A0PJE2 317 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 MUSKO15146 869 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 B4GALT3O60512 393 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 HGFP14210 728 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 GRK4P32298 578 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CASP2P42575 452 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 SLC39A12Q504Y0 691 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 PPP4R4Q6NUP7 873 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CHST15Q7LFX5 561 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 SPATA2LQ8IUW3 424 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 PHYKPLQ8IUZ5 450 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CMTR2Q8IYT2 770 aaKnown RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CLYBLQ8N0X4 340 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 NUDT8Q8WV74 236 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 TCF12Q99081 682 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 ADAM2Q99965 735 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 GPATCH1Q9BRR8 931 aaKnown RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 ANKRD60Q9BZ19 345 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 MRPL40Q9NQ50 206 aaKnown RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 OAZ3Q9UMX2 235 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 FAM50BQ9Y247 325 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CCDC162PA2VCL2 907 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 MROH6A6NGR9 719 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 ANGPT2O15123 496 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 SOAT2O75908 522 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 ATXN1LP0C7T5 689 aaKnown RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 GFAPP14136 432 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 ELNP15502 786 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 SLC6A2P23975 617 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms