RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SPRED1Q7Z699 444 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 PARP8Q8N3A8 854 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 OR6J1Q8NGC5 347 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 PPTC7Q8NI37 304 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 SGCDQ92629 289 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 KCTD15Q96SI1 283 aaPredicted RBP18.13■□□□□ 0.49
PKP3-201ENST00000331563 TRIM8Q9BZR9 551 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 ATP13A3Q9H7F0 1226 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 CHRAC1Q9NRG0 131 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 MRGBPQ9NV56 204 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 THG1LQ9NWX6 298 aaKnown RBP18.13■□□□□ 0.49
PKP3-201ENST00000331563 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.13■□□□□ 0.49
PKP3-201ENST00000331563 FLRT1Q9NZU1 646 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 PLXNB2O15031 1838 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 ABCB7O75027 752 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 ALX3O95076 343 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 MTHFD1P11586 935 aaKnown RBP18.13■□□□□ 0.49
PKP3-201ENST00000331563 ARF4P18085 180 aaPredicted RBP18.13■□□□□ 0.49
PKP3-201ENST00000331563 YWHAQP27348 245 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 PHC1P78364 1004 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 POU5F1BQ06416 359 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.13■□□□□ 0.49
PKP3-201ENST00000331563 C12orf29Q8N999 325 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 TRPV3Q8NET8 790 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 S100ZQ8WXG8 99 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 TRIB2Q92519 343 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 HTRA1Q92743 480 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 SEPHS2Q99611 448 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 CDHR5Q9HBB8 845 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 BAG5Q9UL15 447 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 ZCWPW2A0A1B0GU75 182 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 LACTBL1A8MY62 500 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 C9JVG2 144 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 MFSD11O43934 449 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 CILPO75339 1184 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 MTRF1O75570 445 aaKnown RBP18.13■□□□□ 0.49
PKP3-201ENST00000331563 ITGB3P05106 788 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 LEPRP48357 1165 aaKnown RBP18.13■□□□□ 0.49
PKP3-201ENST00000331563 SUZ12Q15022 739 aaKnown RBP18.13■□□□□ 0.49
PKP3-201ENST00000331563 IMPG1Q17R60 797 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 XAF1Q6GPH4 301 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 PLEKHH3Q7Z736 793 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 ZNF567Q8N184 647 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 C1QTNF1Q9BXJ1 281 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 B3GNT5Q9BYG0 378 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 FKBP14Q9NWM8 211 aa18.13■□□□□ 0.49
PKP3-201ENST00000331563 FAM172BPA6NC97 362 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 M0R3G1 203 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 SLC22A1O15245 554 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 SLC35E2BP0CK96 405 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 STAG3L1P0CL83 205 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 C7P10643 843 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 FCGR1AP12314 374 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 LSM3P62310 102 aaKnown RBP18.12■□□□□ 0.49
PKP3-201ENST00000331563 DPYSL2Q16555 572 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 CEP78Q5JTW2 689 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 MARCH8Q5T0T0 291 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 PIWIL4Q7Z3Z4 852 aaKnown RBP18.12■□□□□ 0.49
PKP3-201ENST00000331563 R3HCC1LQ7Z5L2 792 aaKnown RBP18.12■□□□□ 0.49
PKP3-201ENST00000331563 RNF135Q8IUD6 432 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 ADGRG5Q8IZF4 528 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 NATD1Q8N6N6 113 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 OSCP1Q8WVF1 389 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 MYRFLQ96LU7 910 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 CCDC90BQ9GZT6 254 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 FBRSL1Q9HCM7 1045 aaKnown RBP18.12■□□□□ 0.49
PKP3-201ENST00000331563 HOXC11O43248 304 aaPredicted RBP18.12■□□□□ 0.49
PKP3-201ENST00000331563 LDLRP01130 860 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 SLC26A2P50443 739 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 PLK1P53350 603 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 PIGFQ07326 219 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 GRB14Q14449 540 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 IRAK1BP1Q5VVH5 260 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 FAM219BQ5XKK7 198 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 JADE1Q6IE81 842 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 UGT3A1Q6NUS8 523 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 NT5DC4Q86YG4 428 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 C2orf40Q9H1Z8 148 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 SPC25Q9HBM1 224 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 NEK6Q9HC98 313 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 PCDHGA8Q9Y5G5 932 aa18.12■□□□□ 0.49
PKP3-201ENST00000331563 HACD1B0YJ81 288 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 ANGPT2O15123 496 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 ARPC2O15144 300 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 IL7RP16871 459 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 JUNBP17275 347 aaPredicted RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 CYP2B6P20813 491 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 FRG1Q14331 258 aaKnown RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 GRIK4Q16099 956 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 VPS26BQ4G0F5 336 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 SLX4IPQ5VYV7 408 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 GTF2IRD2BQ6EKJ0 949 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 ADCK1Q86TW2 530 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 GTF2IRD2Q86UP8 949 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 CENPLQ8N0S6 344 aaPredicted RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 TXNDC5Q8NBS9 432 aaKnown RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 TXNDC15Q96J42 360 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 IL12RB2Q99665 862 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms