RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SLC18A1P54219 525 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 EPHB1P54762 984 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 CDKN3Q16667 212 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 TEDDM1Q5T9Z0 273 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 TMEM154Q6P9G4 183 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 BRAT1Q6PJG6 821 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 TXNDC11Q6PKC3 985 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 SERPINA13PQ6UXR4 307 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 RGS9BPQ6ZS82 235 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 GLT6D1Q7Z4J2 308 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 RASSF3Q86WH2 238 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 TMIEQ8NEW7 156 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 ZNF398Q8TD17 642 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 MZB1Q8WU39 189 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 SCRN2Q96FV2 425 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 MSANTD3Q96H12 275 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 SMIM14Q96QK8 99 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 MCCC1Q96RQ3 725 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-202ENST00000324340 MCMBPQ9BTE3 642 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 MTG2Q9H4K7 406 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 SAR1AQ9NR31 198 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 SLC2A4RGQ9NR83 387 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 C20orf96Q9NUD7 363 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-202ENST00000324340 NLE1Q9NVX2 485 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-202ENST00000324340 NSMCE4AQ9NXX6 385 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 DKK3Q9UBP4 350 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 FAM50BQ9Y247 325 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 KCTD3Q9Y597 815 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 IKBKGQ9Y6K9 419 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 ZNF106Q9H2Y7 1883 aaKnown RBP12.74□□□□□ -0.37
DDX39A-202ENST00000324340 CCDC78A2IDD5 438 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 C2orf81A6NN90 581 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 LOC730098B7Z3J9 87 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 UGT1A9O60656 530 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 RPP40O75818 363 aaKnown RBP12.74□□□□□ -0.37
DDX39A-202ENST00000324340 VAPBO95292 243 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 INHBAP08476 426 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 BMP1P13497 986 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 LPOP22079 712 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-202ENST00000324340 CNTFP26441 200 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 HMGCLP35914 325 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 IL12RB1P42701 662 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 SERPINB9P50453 376 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 POLR2LP62875 67 aaKnown RBP12.74□□□□□ -0.37
DDX39A-202ENST00000324340 PFKPQ01813 784 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 ELAVL3Q14576 367 aaKnown RBP12.74□□□□□ -0.37
DDX39A-202ENST00000324340 HSP90AA5PQ58FG0 334 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 ZNF805Q5CZA5 627 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 ARSIQ5FYB1 569 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 TMEM196Q5HYL7 178 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 EGFLAMQ63HQ2 1017 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 PACS1Q6VY07 963 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 TRIM74Q86UV6 250 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 TRIM73Q86UV7 250 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 NDUFAF2Q8N183 169 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 ZNF366Q8N895 744 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 DYDC1Q8WWB3 177 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 EID2BQ96D98 161 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 KLHL32Q96NJ5 620 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 CPNE1Q99829 537 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 FAM167BQ9BTA0 163 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 MFSD1Q9H3U5 465 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 UGT1A7Q9HAW7 530 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 UGT1A10Q9HAW8 530 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 UGT1A8Q9HAW9 530 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 SUN2Q9UH99 717 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 LNPEPQ9UIQ6 1025 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 PPM1HQ9ULR3 514 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 PIAS3Q9Y6X2 628 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 COMMD3-BMI1R4GMX3 469 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 SCN8AQ9UQD0 1980 aa12.74□□□□□ -0.37
DDX39A-202ENST00000324340 IQANK1A0A1B0GTG1 560 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 H7C0S8 307 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 NVLO15381 856 aaKnown RBP12.73□□□□□ -0.37
DDX39A-202ENST00000324340 PRNPP04156 253 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 ALPIP09923 528 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 SRFP11831 508 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 HLA-EP13747 358 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 CTPS1P17812 591 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 HNF1BP35680 557 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 GP5P40197 560 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 ARSDP51689 593 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 PTPRRQ15256 657 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 TMED2Q15363 201 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 GRTP1Q5TC63 336 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 LGSNQ5TDP6 509 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 NEPROQ6NW34 567 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 TPRG1Q6ZUI0 275 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 GALNT7Q86SF2 657 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 TRABD2AQ86V40 505 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 EXOC3L1Q86VI1 746 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 STK40Q8N2I9 435 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 FITM2Q8N6M3 262 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 OR13C4Q8NGS5 318 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 GRIN3AQ8TCU5 1115 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 CALML6Q8TD86 181 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 SCG3Q8WXD2 468 aaKnown RBP12.73□□□□□ -0.37
DDX39A-202ENST00000324340 OR8D1Q8WZ84 308 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms