RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 IL23RQ5VWK5 629 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 SIDT2Q8NBJ9 832 aaKnown RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 PANX1Q96RD7 426 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 TUBGCP5Q96RT8 1024 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 RTKNQ9BST9 563 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 TTPALQ9BTX7 342 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 CCSER2Q9H7U1 834 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 DOLKQ9UPQ8 538 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 ZFP37Q9Y6Q3 630 aaPredicted RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 A0A087WXM4 84 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 SLC22A3O75751 556 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 TGDSO95455 350 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 CCNFP41002 786 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 PRKCZQ05513 592 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 PAQR3Q6TCH7 311 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 CRTC3Q6UUV7 619 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 VN1R5Q7Z5H4 357 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 RAB42Q8N4Z0 105 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 ARL14EPQ8N8R7 260 aaPredicted RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 OTUB1Q96FW1 271 aaPredicted RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 SH3GL1Q99961 368 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 BCO2Q9BYV7 579 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 LNPEPQ9UIQ6 1025 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 TMCC3Q9ULS5 477 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 TBC1D3BA6NDS4 549 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 MAP3K13O43283 966 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 TYROBPO43914 113 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 IL1BP01584 269 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 FGF1P05230 155 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 FCGR1AP12314 374 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 TACR2P21452 398 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 GALK1P51570 392 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 HK2P52789 917 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 ADARP55265 1226 aaKnown RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 CDH15P55291 814 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 SETMARQ53H47 684 aaPredicted RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 FBXL19Q6PCT2 694 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 RHBGQ9H310 441 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 H2AFY2Q9P0M6 372 aaPredicted RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 LEF1Q9UJU2 399 aaPredicted RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 CNOT6Q9ULM6 557 aaKnown RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 MATN3O15232 486 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 FFAR2O15552 330 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 CYP2A7P20853 494 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 MTPNP58546 118 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 SLC24A5Q71RS6 500 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 ZC3H7AQ8IWR0 971 aaKnown RBP16.44■□□□□ 0.22
CLIP4-201ENST00000320081 TNIP2Q8NFZ5 429 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 STN1Q9H668 368 aaKnown RBP16.44■□□□□ 0.22
CLIP4-201ENST00000320081 CCDC162PA2VCL2 907 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.44■□□□□ 0.22
CLIP4-201ENST00000320081 PRMT5O14744 637 aaPredicted RBP16.44■□□□□ 0.22
CLIP4-201ENST00000320081 KPNA5O15131 536 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 KRT8P05787 483 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 DGKAP23743 735 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 NOVP48745 357 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 AFTPHQ6ULP2 937 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 ANKRD27Q96NW4 1050 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 TEX12Q9BXU0 123 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 CRTAC1Q9NQ79 661 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 H0Y858 1186 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 DLX3O60479 287 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 CLIC3O95833 236 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 EPORP19235 508 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 PLEKHG4Q58EX7 1191 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 TSTD2Q5T7W7 516 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 TMEM40Q8WWA1 233 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 DLG3Q92796 817 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 USP29Q9HBJ7 922 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 AMBNQ9NP70 447 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 DAPK2Q9UIK4 370 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 DUSP12Q9UNI6 340 aa16.44■□□□□ 0.22
CLIP4-201ENST00000320081 TOPAZ1Q8N9V7 1692 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 SNAI1O95863 264 aaPredicted RBP16.43■□□□□ 0.22
CLIP4-201ENST00000320081 CAPN1P07384 714 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 ALDH4A1P30038 563 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 HMGCS1Q01581 520 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 MAP3K10Q02779 954 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 DLG1Q12959 904 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 XKR6Q5GH73 641 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 PTCD3Q96EY7 689 aaKnown RBP16.43■□□□□ 0.22
CLIP4-201ENST00000320081 KCNA7Q96RP8 456 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 COPS8Q99627 209 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 EMILIN2Q9BXX0 1053 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 IPPKQ9H8X2 491 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 FADS3Q9Y5Q0 445 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 DGKBQ9Y6T7 804 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 SNAP91O60641 907 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 KCNH1O95259 989 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 GNA12Q03113 381 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 CLCQ05315 142 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 ZYG11AQ6WRX3 759 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 B3GNT6Q6ZMB0 384 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 GPRIN1Q7Z2K8 1008 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 UBR7Q8N806 425 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 EPB41L4BQ9H329 900 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 KRT84Q9NSB2 600 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 PAIP2BQ9ULR5 123 aaKnown RBP16.43■□□□□ 0.22
CLIP4-201ENST00000320081 DERAQ9Y315 318 aa16.43■□□□□ 0.22
CLIP4-201ENST00000320081 NEDD8-MDP1E9PL57 170 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms