RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 MID2Q9UJV3 735 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 NEDD8-MDP1E9PL57 170 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 CHRM3P20309 590 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 IRS1P35568 1242 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 STC1P52823 247 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 ATXN3P54252 364 aaPredicted RBP15.91■□□□□ 0.14
SHISA2-201ENST00000319420 SCUBE1Q8IWY4 988 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 ULK2Q8IYT8 1036 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 ELMOD1Q8N336 334 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 FATE1Q969F0 183 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 TSPAN17Q96FV3 270 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 GPR21Q99679 349 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 C17orf80Q9BSJ5 609 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 DCLRE1BQ9H816 532 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 LHX3Q9UBR4 397 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 RAP2CQ9Y3L5 183 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 DNAH14Q0VDD8 3507 aa15.91■□□□□ 0.14
SHISA2-201ENST00000319420 LEFTY2O00292 366 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 AIM2O14862 343 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 TBX10O75333 385 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 EPOP01588 193 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 ADH1AP07327 375 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 GFAPP14136 432 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 EN2P19622 333 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 LPOP22079 712 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 ATP5F1P24539 256 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 ARL1P40616 181 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 ASPHQ12797 758 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 TEAD2Q15562 447 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 CCDC6Q16204 474 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 TMEM25Q86YD3 366 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 SIDT2Q8NBJ9 832 aaKnown RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 GCNAQ96QF7 691 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 PANX3Q96QZ0 392 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 SIKE1Q9BRV8 207 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 LINC00597Q9H2U6 94 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 PTGDR2Q9Y5Y4 395 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 WASF2Q9Y6W5 498 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 MATN2O00339 956 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 HDAC3O15379 428 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 IPO13O94829 963 aaKnown RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 GLUD1P00367 558 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 MSX2P35548 267 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 ZNF140P52738 457 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 TSNAXIP1Q2TAA8 658 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 ACBD5Q5T8D3 534 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 FBXO46Q6PJ61 603 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 ISCA2Q86U28 154 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 POF1BQ8WVV4 589 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 N4BP2L2Q92802 583 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 MIEF2Q96C03 454 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 EID2BQ96D98 161 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 NSUN5Q96P11 429 aaKnown RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 LENG8Q96PV6 779 aaPredicted RBP15.9■□□□□ 0.14
SHISA2-201ENST00000319420 TMEM106CQ9BVX2 250 aa15.9■□□□□ 0.14
SHISA2-201ENST00000319420 A0A088AWK7 358 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 TRAV19A0A0A6YYK7 116 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 GRID2O43424 1007 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 TM7SF2O76062 418 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 PSMG1O95456 288 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 COL6A2P12110 1019 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 UGT1A6P19224 532 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 UGT1A1P22309 533 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 UGT1A4P22310 534 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 RFC2P35250 354 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 UGT1A3P35503 534 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 UGT1A5P35504 534 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 OR4D1Q15615 310 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 PPP1R3AQ16821 1122 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 C1orf53Q5VUE5 145 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 FRMD7Q6ZUT3 714 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 CLDN19Q8N6F1 224 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 CFAP61Q8NHU2 1237 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 SORCS1Q8WY21 1168 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 C2orf49Q9BVC5 232 aaPredicted RBP15.89■□□□□ 0.13
SHISA2-201ENST00000319420 C1orf232A0A0U1RR37 186 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 GRXCR1A8MXD5 290 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 TMEM114B3SHH9 223 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 MAGEC1O60732 1142 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 LILRB3O75022 631 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 RAP1GDS1P52306 607 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 COPAP53621 1224 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 NME5P56597 212 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 TIAL1Q01085 375 aaKnown RBP eCLIP15.89■□□□□ 0.13
SHISA2-201ENST00000319420 PRKAA1Q13131 559 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 RIPOR1Q6ZS17 1223 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 TMC8Q8IU68 726 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 RNF148Q8N7C7 305 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 PTGR2Q8N8N7 351 aaPredicted RBP15.89■□□□□ 0.13
SHISA2-201ENST00000319420 MMADHCQ9H3L0 296 aaPredicted RBP15.89■□□□□ 0.13
SHISA2-201ENST00000319420 STN1Q9H668 368 aaKnown RBP15.89■□□□□ 0.13
SHISA2-201ENST00000319420 IL23AQ9NPF7 189 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 GIMAP2Q9UG22 337 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 IKZF3Q9UKT9 509 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 INTS6Q9UL03 887 aaKnown RBP15.89■□□□□ 0.13
SHISA2-201ENST00000319420 COMMD10Q9Y6G5 202 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 SUPT3HB4E1H0 165 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 CDC7O00311 574 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 SUPT3HO75486 399 aa15.89■□□□□ 0.13
SHISA2-201ENST00000319420 CLDN7O95471 211 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms