RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ITGB1P05556 798 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 IDO1P14902 403 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 SNRPD1P62314 119 aaKnown RBP13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 TSNQ15631 228 aaKnown RBP13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 TXNDC11Q6PKC3 985 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 C17orf99Q6UX52 265 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 ARPINQ7Z6K5 226 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 ESAMQ96AP7 390 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 MIPEPQ99797 713 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 SH3GL1Q99961 368 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 ZFP14Q9HCL3 533 aa13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
PCDHB9-201ENST00000316105 EME2A4GXA9 379 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 A8MT66 165 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ALDH1A2O94788 518 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 MSH3P20585 1137 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ITGAXP20702 1163 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ADSLP30566 484 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 MAD2L1Q13257 205 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 DET1Q7L5Y6 550 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 PIM3Q86V86 326 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 KHSRPQ92945 711 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 RMND5BQ96G75 393 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 TBCDQ9BTW9 1192 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 EVLQ9UI08 416 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 LEF1Q9UJU2 399 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 BLOC1S6Q9UL45 172 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 C16orf96A6NNT2 1141 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 UQCRBP14927 111 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 MAPK1P28482 360 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 MAPK8P45983 427 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 CLCQ05315 142 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 PRKG2Q13237 762 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 GRAMD4Q6IC98 578 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 EPGNQ6UW88 154 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ALKAL1Q6UXT8 129 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ADCK2Q7Z695 626 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 CYP2S1Q96SQ9 504 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 COMMD8Q9NX08 183 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 SPASTQ9UBP0 616 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 PPM1HQ9ULR3 514 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 AP4B1Q9Y6B7 739 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 TRAV19A0A0A6YYK7 116 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 SIX3O95343 332 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 SERPIND1P05546 499 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 TRAF2Q12933 501 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 VPS26BQ4G0F5 336 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 FAM98BQ52LJ0 330 aaKnown RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 RPS27LQ71UM5 84 aaKnown RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ARHGAP22Q7Z5H3 698 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ACTRT2Q8TDY3 377 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 PTCD3Q96EY7 689 aaKnown RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ZNF570Q96NI8 536 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 GRIP2Q9C0E4 1043 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 LIMD1Q9UGP4 676 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 TP73O15350 636 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 CLOCKO15516 846 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 LZTS3O60299 673 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 CPSF4O95639 269 aaKnown RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ZNF682O95780 498 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 CD68P34810 354 aaPredicted RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 RPL38P63173 70 aaKnown RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 PAQR9Q6ZVX9 377 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 HORMAD1Q86X24 394 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 MCOLN3Q8TDD5 553 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 OSCP1Q8WVF1 389 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 ARNTL2Q8WYA1 636 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 MED8Q96G25 268 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 BDH2Q9BUT1 245 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 SRRDQ9UH36 339 aa13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 FCF1Q9Y324 198 aaKnown RBP13.38□□□□□ -0.27
PCDHB9-201ENST00000316105 KIAA1217Q5T5P2 1943 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 MAFKO60675 156 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 FKTNO75072 461 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 ANXA5P08758 320 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 T-ENOLP0DO92 83 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 CYP2A7P20853 494 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 LCP2Q13094 533 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 ADRM1Q16186 407 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 PAOXQ6QHF9 649 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 FAM9CQ8IZT9 166 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 LPGAT1Q92604 370 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 HBEGFQ99075 208 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 ABCG8Q9H221 673 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 ZFYVE1Q9HBF4 777 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 FNIP2Q9P278 1114 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 ZNHIT2Q9UHR6 403 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 DOCK1Q14185 1865 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 DPPA5A6NC42 116 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 SH3BGRLO75368 114 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 ULK1O75385 1050 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 DEAF1O75398 565 aaPredicted RBP13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 HAPLN1P10915 354 aaPredicted RBP13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 EPB42P16452 691 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 CDH2P19022 906 aaPredicted RBP13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 GATMP50440 423 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms