RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 IVLP07476 585 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 CD48P09326 243 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 CDH6P55285 790 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 SLC25A11Q02978 314 aaKnown RBP17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 PTSQ03393 145 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 MMRN1Q13201 1228 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 PIGHQ14442 188 aaPredicted RBP17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 RALGPS1Q5JS13 557 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 MANEAQ5SRI9 462 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 NKAIN2Q5VXU1 208 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 DOK6Q6PKX4 331 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 BBS5Q8N3I7 341 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 SCAMP4Q969E2 229 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 SCARF2Q96GP6 870 aaPredicted RBP17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 SEMA3CQ99985 751 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 THAP2Q9H0W7 228 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 ABCG8Q9H221 673 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 MAST4O15021 2626 aa17.4■□□□□ 0.38
EXOSC4-201ENST00000316052 FZD6O60353 706 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 NFKBIAP25963 317 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 GPR3P46089 330 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 GPR1P46091 355 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 ARSDP51689 593 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 LRRC66Q68CR7 880 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 USP45Q70EL2 814 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 TRIM74Q86UV6 250 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 NIPA2Q8N8Q9 360 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 NSMCE1Q8WV22 266 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 PMEPA1Q969W9 287 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 AGAP2Q99490 1192 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 SEPT10Q9P0V9 454 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 PCDHGA4Q9Y5G9 962 aa17.39■□□□□ 0.37
EXOSC4-201ENST00000316052 FLNCQ14315 2725 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 SLC28A2O43868 658 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 FGF3P11487 239 aaPredicted RBP17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 ZNF165P49910 485 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 ARSEP51690 589 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 CYP4F2P78329 520 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 IQCB1Q15051 598 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 ATP13A4Q4VNC1 1196 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 ADAMTSL4Q6UY14 1074 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 FAM71BQ8TC56 605 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 JPH3Q8WXH2 748 aaPredicted RBP17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 AP2M1Q96CW1 435 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 CCDC74BQ96LY2 380 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 NUP85Q9BW27 656 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 B3GNT4Q9C0J1 378 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 IP6K2Q9UHH9 426 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 NAV2Q8IVL1 2488 aa17.38■□□□□ 0.37
EXOSC4-201ENST00000316052 UBR5O95071 2799 aaPredicted RBP17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 TRBV23OR9-2A0A075B6M9 112 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 IGHV1OR21-1A0A087WYE8 117 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 A0A0J9YYE9 177 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 HGSO14964 777 aaPredicted RBP17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 PRLP01236 227 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 TRBC1P01850 177 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 ITGB2P05107 769 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 CYP1A2P05177 515 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 MPSTP25325 297 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 CSF2RBP32927 897 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 SERPINB6P35237 376 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 ACTR1BP42025 376 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 LIMK2P53671 638 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 ACTR1AP61163 376 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 ITKQ08881 620 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 NFATC3Q12968 1075 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 SQSTM1Q13501 440 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 KRT81Q14533 505 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 CLPPQ16740 277 aaPredicted RBP17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 PYCR3Q53H96 274 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 FIGNQ5HY92 759 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 MARK2Q7KZI7 788 aaKnown RBP17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 CPNE8Q86YQ8 564 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 LRRC49Q8IUZ0 686 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 LRRN4Q8WUT4 740 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 HTR3CQ8WXA8 447 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 TMEM9Q9P0T7 183 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 ANAPC7Q9UJX3 599 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 PCDHB11Q9Y5F2 797 aa17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 PCYT1BQ9Y5K3 369 aaPredicted RBP17.37■□□□□ 0.37
EXOSC4-201ENST00000316052 A0A087X0T9 212 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 MFSD11O43934 449 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 MAP3K6O95382 1288 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 EML2O95834 649 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 SERPINC1P01008 464 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 FAM87AP0C7U9 286 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 FAM228BP0C875 321 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 ITGB6P18564 788 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 CD82P27701 267 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 GARSP41250 739 aaKnown RBP17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 DSC2Q02487 901 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 GALNT2Q10471 571 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 TBR1Q16650 682 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 TDRD12Q587J7 1177 aaKnown RBP17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 TMEM164Q5U3C3 297 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 NLRP8Q86W28 1048 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 ZNF761Q86XN6 746 aaPredicted RBP17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 MAML1Q92585 1016 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms