RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 LINC00116Q8NCU8 138 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 HSD3B7Q9H2F3 369 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ALG2Q9H553 416 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 FAM196BA6NMK8 535 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 DDX3YO15523 660 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 UGT1A5P35504 534 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 GRIA3P42263 894 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 MRPS22P82650 360 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 FSTL1Q12841 308 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CKAP5Q14008 2032 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 HABP4Q5JVS0 413 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 VARS2Q5ST30 1063 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 RSBN1Q5VWQ0 802 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 CRTC3Q6UUV7 619 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 TTC7BQ86TV6 843 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 FITM2Q8N6M3 262 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 MAGIXQ9H6Y5 334 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CCDC167Q9P0B6 97 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ZNF282Q9UDV7 671 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 CABIN1Q9Y6J0 2220 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 AHDC1Q5TGY3 1603 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 NDUFS2O75306 463 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CYP7B1O75881 506 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 YWHAQP27348 245 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ACADLP28330 430 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 TSTA3Q13630 321 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 MOGQ16653 247 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 GALNTL6Q49A17 601 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 DENND5AQ6IQ26 1287 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 GPALPP1Q8IXQ4 340 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 OR8H2Q8N162 312 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 DRAXINQ8NBI3 349 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 GRIP2Q9C0E4 1043 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ACTR6Q9GZN1 396 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 MRPL39Q9NYK5 338 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 RIMKLBQ9ULI2 386 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 UNGP13051 313 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 PTGER3P43115 390 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 EIPR1Q53HC9 387 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 IL23RQ5VWK5 629 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 KDELC2Q7Z4H8 507 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 VWA7Q9Y334 891 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 NR2E1Q9Y466 385 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ASXL3Q9C0F0 2248 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 FAM86C2PA6NEL3 165 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 SNPHO15079 494 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 AKAP8O43823 692 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 CELF3Q5SZQ8 465 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 ZNF467Q7Z7K2 595 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 IFNEQ86WN2 208 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 DQX1Q8TE96 717 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 CXorf40BQ96DE9 158 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 C12orf66Q96MD2 445 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CKLFQ9UBR5 152 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 HACL1Q9UJ83 578 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 IKZF3Q9UKT9 509 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 TESMINQ9Y4I5 508 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CNTNAP1P78357 1384 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 LRP5O75197 1615 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CILPO75339 1184 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CBX6O95503 412 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 PFKLP17858 780 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 OR1E1P30953 314 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 MRPS5P82675 430 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 CNTN2Q02246 1040 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 HNRNPDQ14103 355 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 ZNF181Q2M3W8 571 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 LCN1P1Q5VSP4 162 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CNSTQ6PJW8 725 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 FAM228AQ86W67 206 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 TAB3Q8N5C8 712 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 C11orf65Q8NCR3 313 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 C10orf82Q8WW14 230 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ZBTB12Q9Y330 459 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 IGKV6D-41A0A0C4DH26 115 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 PRORSD1PA6NEY8 169 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 H3BUI4 141 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 POLRMTO00411 1230 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 ZNF682O95780 498 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 PTGIRP43119 386 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ARPC4P59998 168 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 PPP3CAQ08209 521 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 SF3A3Q12874 501 aaKnown RBP eCLIP8.8□□□□□ -1
COL6A5-202ENST00000312481 RBM12BQ8IXT5 1001 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 SCGB3A2Q96PL1 93 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 MAGEH1Q9H213 219 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 TFB2MQ9H5Q4 396 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 COMMD9Q9P000 198 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 PLIN3O60664 434 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 XYLBO75191 536 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 GNPDA1P46926 289 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 APOBEC3HQ6NTF7 200 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 PLEKHH3Q7Z736 793 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 GPR180Q86V85 440 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 MARVELD2Q8N4S9 558 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 PLD4Q96BZ4 506 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 C6orf62Q9GZU0 229 aaPredicted RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 RHBDL2Q9NX52 303 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 TPRP12270 2363 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms