RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FAM149AA5PLN7 773 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 HYAL3O43820 417 aaPredicted RBP12□□□□□ -0.49
SCFD1-201ENST00000311943 PCDHGA12O60330 932 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A9O60656 530 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 CEACAM5P06731 702 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 PRSS56P0CW18 603 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 NME1P15531 152 aaKnown RBP12□□□□□ -0.49
SCFD1-201ENST00000311943 BPIP17213 487 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A6P19224 532 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A1P22309 533 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A4P22310 534 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 AK4P27144 223 aaPredicted RBP12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A3P35503 534 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A5P35504 534 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 SPINT3P49223 89 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 ARRB1P49407 418 aaPredicted RBP12□□□□□ -0.49
SCFD1-201ENST00000311943 SUOXP51687 545 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 CDK3Q00526 305 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 NFATC4Q14934 902 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 AGERQ15109 404 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 LONRF2Q1L5Z9 754 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 ESRP1Q6NXG1 681 aaKnown RBP12□□□□□ -0.49
SCFD1-201ENST00000311943 TMC3Q7Z5M5 1100 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 ERVMER34-1Q9H9K5 563 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A7Q9HAW7 530 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A10Q9HAW8 530 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 UGT1A8Q9HAW9 530 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 ZFYVE1Q9HBF4 777 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 CYP4F12Q9HCS2 524 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 APOBEC3BQ9UH17 382 aaKnown RBP12□□□□□ -0.49
SCFD1-201ENST00000311943 ZNF148Q9UQR1 794 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 U3KQA8 63 aa12□□□□□ -0.49
SCFD1-201ENST00000311943 GOLGA6L9A6NEM1 432 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 CSRP1P21291 193 aaKnown RBP11.99□□□□□ -0.49
SCFD1-201ENST00000311943 CETN2P41208 172 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 GPR1P46091 355 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 SRP54P61011 504 aaKnown RBP11.99□□□□□ -0.49
SCFD1-201ENST00000311943 TMPRSS15P98073 1019 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 OVGP1Q12889 678 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 RANBP10Q6VN20 620 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 TTC30BQ8N4P2 665 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 OR13C4Q8NGS5 318 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 PATE1Q8WXA2 126 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 LYSMD1Q96S90 227 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 ADGRE3Q9BY15 652 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 WDR26Q9H7D7 661 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 ETNK1Q9HBU6 452 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 SIRPGQ9P1W8 387 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 SCN8AQ9UQD0 1980 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 TCRBV7S3A2A0A539 114 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 C5orf60A6NFR6 353 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 AGRPO00253 132 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 RASGRP1O95267 797 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 CEACAM1P13688 526 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 CES1P23141 567 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 NUDT1P36639 197 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 VPS41P49754 854 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 HK3P52790 923 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 PPARDQ03181 441 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 SLC14A1Q13336 389 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 SMAD1Q15797 465 aaKnown RBP11.99□□□□□ -0.49
SCFD1-201ENST00000311943 HENMT1Q5T8I9 393 aaKnown RBP11.99□□□□□ -0.49
SCFD1-201ENST00000311943 KCTD11Q693B1 232 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 MACC1Q6ZN28 852 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 ANP32BQ92688 251 aaKnown RBP11.99□□□□□ -0.49
SCFD1-201ENST00000311943 SKA1Q96BD8 255 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 FSD1LQ9BXM9 530 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 TEX101Q9BY14 249 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 GPR63Q9BZJ6 419 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 TRHDEQ9UKU6 1024 aa11.99□□□□□ -0.49
SCFD1-201ENST00000311943 GOLGA4Q13439 2230 aaKnown RBP11.99□□□□□ -0.49
SCFD1-201ENST00000311943 GAPDHSO14556 408 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-201ENST00000311943 YY2O15391 372 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 FLRT2O43155 660 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 MTSS1O43312 755 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 EML2O95834 649 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 FTH1P19P0C7X4 201 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 ZNF883P0CG24 379 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 RPL22P35268 128 aaKnown RBP11.98□□□□□ -0.49
SCFD1-201ENST00000311943 MRPS25P82663 173 aaKnown RBP11.98□□□□□ -0.49
SCFD1-201ENST00000311943 CCDC38Q502W7 563 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 DHRS13Q6UX07 377 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 OR56A4Q8NGH8 313 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 CNDP2Q96KP4 475 aaKnown RBP11.98□□□□□ -0.49
SCFD1-201ENST00000311943 OSBPL9Q96SU4 736 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 VAT1Q99536 393 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 MAGEE1Q9HCI5 957 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 KLQ9UEF7 1012 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 KLK13Q9UKR3 277 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 TTC7AQ9ULT0 858 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-201ENST00000311943 SUFUQ9UMX1 484 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 WASF3Q9UPY6 502 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 JRKLQ9Y4A0 524 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 ASXL3Q9C0F0 2248 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 A0A1W2PQ67 120 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 CFAP69A5D8W1 941 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 AQP9O43315 295 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 NRDCO43847 1150 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 GRK6P43250 576 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 GNPDA1P46926 289 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms