RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 NRG1Q02297 640 aaPredicted RBP25.29■■□□□ 1.64
HOXB3-201ENST00000311626 ZNF235Q14590 738 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 CCSER2Q9H7U1 834 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 HGFP14210 728 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 ZNF37AP17032 561 aaPredicted RBP25.28■■□□□ 1.64
HOXB3-201ENST00000311626 EEF1DP29692 281 aaKnown RBP25.28■■□□□ 1.64
HOXB3-201ENST00000311626 KCNQ1P51787 676 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 SERINC3Q13530 473 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 CLLU1OSQ5K130 101 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 C8orf82Q6P1X6 216 aaPredicted RBP25.28■■□□□ 1.64
HOXB3-201ENST00000311626 ATP6V0D2Q8N8Y2 350 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 ZNF597Q96LX8 424 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 ENPP3O14638 875 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 CLASP2O75122 1294 aaKnown RBP25.28■■□□□ 1.64
HOXB3-201ENST00000311626 AGTR2P50052 363 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 FKBP1BP68106 108 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 APOFQ13790 326 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 NADSYN1Q6IA69 706 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 ZBTB49Q6ZSB9 765 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 ZNF598Q86UK7 904 aaKnown RBP25.28■■□□□ 1.64
HOXB3-201ENST00000311626 OR7D4Q8NG98 312 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 VPS33AQ96AX1 596 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 PHF12Q96QT6 1004 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 RBM38Q9H0Z9 239 aaKnown RBP25.28■■□□□ 1.64
HOXB3-201ENST00000311626 CRISPLD1Q9H336 500 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 CATSPERZQ9NTU4 200 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 SPO11Q9Y5K1 396 aa25.28■■□□□ 1.64
HOXB3-201ENST00000311626 IGHA2P01877 340 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 HSPA13P48723 471 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 PRKCQQ04759 706 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 OR4L1Q8NH43 312 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 BTN2A3PQ96KV6 586 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 PIF1Q9H611 641 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 PATJQ8NI35 1801 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 ARHGAP10A1A4S6 786 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 CDC7O00311 574 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 CLGNO14967 610 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 RHOBTB1O94844 696 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 RGRP47804 291 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 GALNT1Q10472 559 aaPredicted RBP25.27■■□□□ 1.64
HOXB3-201ENST00000311626 TRAP1Q12931 704 aaKnown RBP25.27■■□□□ 1.64
HOXB3-201ENST00000311626 GPR162Q16538 588 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 VARS2Q5ST30 1063 aaKnown RBP25.27■■□□□ 1.64
HOXB3-201ENST00000311626 PBXIP1Q96AQ6 731 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 TEX37Q96LM6 180 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 SEPT5Q99719 369 aaPredicted RBP25.27■■□□□ 1.64
HOXB3-201ENST00000311626 LIN28AQ9H9Z2 209 aaKnown RBP25.27■■□□□ 1.64
HOXB3-201ENST00000311626 HCSTQ9UBK5 93 aa25.27■■□□□ 1.64
HOXB3-201ENST00000311626 HEMK1Q9Y5R4 338 aaPredicted RBP25.27■■□□□ 1.64
HOXB3-201ENST00000311626 CYBAP13498 195 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 PLOD1Q02809 727 aaPredicted RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 TSNQ15631 228 aaKnown RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 TSPAN14Q8NG11 270 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 GIPC2Q8TF65 315 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 UROC1Q96N76 676 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 CCT7Q99832 543 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 ZBED2Q9BTP6 218 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 TRMOQ9BU70 441 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 SPON2Q9BUD6 331 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 POLR1EQ9GZS1 481 aaKnown RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 EPB41L1Q9H4G0 881 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 CMTM6Q9NX76 183 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 POLG2Q9UHN1 485 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 HTRA2O43464 458 aaPredicted RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 KPNA6O60684 536 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 RPP40O75818 363 aaKnown RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 MTHFD1P11586 935 aaKnown RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 CASP2P42575 452 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 RPS6KA2Q15349 733 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 FUT11Q495W5 492 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 MRNIPQ6NTE8 343 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 SLC15A3Q8IY34 581 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 DCP1BQ8IZD4 617 aaKnown RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 OR2T34Q8NGX1 318 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 OR2T3Q8NH03 318 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 TADA1Q96BN2 335 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 ZFRQ96KR1 1074 aaKnown RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 ATOH8Q96SQ7 321 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 SLC30A3Q99726 388 aa25.26■■□□□ 1.63
HOXB3-201ENST00000311626 MRPL40Q9NQ50 206 aaKnown RBP25.26■■□□□ 1.63
HOXB3-201ENST00000311626 GNAO1P09471 354 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 IL10RBQ08334 325 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 CTXN3Q4LDR2 81 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 B3GNT6Q6ZMB0 384 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 PHYKPLQ8IUZ5 450 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 LGI2Q8N0V4 545 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 MIER2Q8N344 545 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 DNAJB14Q8TBM8 379 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 HIC2Q96JB3 615 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 FBXO44Q9H4M3 255 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 RRAGCQ9HB90 399 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 SPC25Q9HBM1 224 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.25■■□□□ 1.63
HOXB3-201ENST00000311626 NDUFA13Q9P0J0 144 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 USP22Q9UPT9 525 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 IGLV3-10A0A075B6K4 115 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 ANGPT2O15123 496 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 NCK1P16333 377 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 OXTRP30559 389 aa25.25■■□□□ 1.63
HOXB3-201ENST00000311626 SETMARQ53H47 684 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms