RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TUBA3EQ6PEY2 450 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 FBXO16Q8IX29 292 aaPredicted RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 SLC5A5Q92911 643 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 CITED4Q96RK1 184 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 NUP50Q9UKX7 468 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 MSCO60682 206 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 NPR2P20594 1047 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 RAPSNQ13702 412 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 ZIK1Q3SY52 487 aaPredicted RBP15.46■□□□□ 0.06
HCFC1-201ENST00000310441 ADNP2Q6IQ32 1131 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 ADCY4Q8NFM4 1077 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 DIRAS2Q96HU8 199 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 AIF1LQ9BQI0 150 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 KCND1Q9NSA2 647 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 AZIN1O14977 448 aa15.46■□□□□ 0.06
HCFC1-201ENST00000310441 CELF2O95319 508 aaKnown RBP15.46■□□□□ 0.06
HCFC1-201ENST00000310441 ATG13O75143 517 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 MFSD10Q14728 455 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 TEAD4Q15561 434 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 SLC25A25Q6KCM7 469 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 PAMR1Q6UXH9 720 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 FRRS1Q6ZNA5 592 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 SLC34A3Q8N130 599 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 UNKQ9C0B0 810 aaKnown RBP15.45■□□□□ 0.06
HCFC1-201ENST00000310441 TMEM27Q9HBJ8 222 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 CALML5Q9NZT1 146 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 TIPRLO75663 272 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 PSMB4P28070 264 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 NAGLUP54802 743 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 CBX2Q14781 532 aaPredicted RBP15.45■□□□□ 0.06
HCFC1-201ENST00000310441 NDUFA9Q16795 377 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 SLC41A1Q8IVJ1 513 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 MCEMP1Q8IX19 187 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 FAM13CQ8NE31 585 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 AP1S3Q96PC3 154 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 A0A1W2PQ67 120 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 ZBTB7AO95365 584 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 FAM83AQ86UY5 434 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 PTGR2Q8N8N7 351 aaPredicted RBP15.45■□□□□ 0.06
HCFC1-201ENST00000310441 MKL1Q969V6 931 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 TAAR1Q96RJ0 339 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 AP4B1Q9Y6B7 739 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 PACS2Q86VP3 889 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 OR2T34Q8NGX1 318 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 OR2T3Q8NH03 318 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 REPS2Q8NFH8 660 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 MBOAT7Q96N66 472 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 PCBD2Q9H0N5 130 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 KCNIP3Q9Y2W7 256 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 TRPV2Q9Y5S1 764 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 TPH1P17752 444 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 IGFBP5P24593 272 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 MECP2P51608 486 aaKnown RBP15.45■□□□□ 0.06
HCFC1-201ENST00000310441 ZNF234Q14588 700 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 ZZZ3Q8IYH5 903 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 PNLDC1Q8NA58 520 aaKnown RBP15.45■□□□□ 0.06
HCFC1-201ENST00000310441 HSFY1Q96LI6 401 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 MAGEE1Q9HCI5 957 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 ABI3Q9P2A4 366 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 ADGRE2Q9UHX3 823 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 SNX3O60493 162 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 C4orf46Q504U0 113 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 OR2L3Q8NG85 312 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 SUN5Q8TC36 379 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 FAM124BQ9H5Z6 455 aaPredicted RBP15.45■□□□□ 0.06
HCFC1-201ENST00000310441 COPS7AQ9UBW8 275 aa15.45■□□□□ 0.06
HCFC1-201ENST00000310441 UBXN7O94888 489 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 C17orf64Q86WR6 236 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 CLIC5Q9NZA1 410 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 DIP2AQ14689 1571 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 CNTNAP4Q9C0A0 1308 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 KCNK1O00180 336 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 TRBC1P01850 177 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 USP49Q70CQ1 688 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 BAP1Q92560 729 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 PCDHB1Q9Y5F3 818 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 ANXA2P2A6NMY6 339 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 PPEF2O14830 753 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 ANXA2P07355 339 aaKnown RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 NUDT17P0C025 328 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 DNASE1L1P49184 302 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 BTG3Q14201 252 aaPredicted RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 PGM5Q15124 567 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 PQLC1Q8N2U9 271 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 ZNF224Q9NZL3 707 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 KAT7O95251 611 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 ABCA11PQ4W5N1 156 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 KLHL22Q53GT1 634 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 PIGXQ8TBF5 258 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 DCAKDQ8WVC6 231 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 DNAAF2Q9NVR5 837 aaKnown RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 CABYRO75952 493 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 PGRP06401 933 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 RARAP10276 462 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 TFEBP19484 476 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 SP100P23497 879 aaPredicted RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 IFI35P80217 286 aaPredicted RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 CAPN13Q6MZZ7 669 aaPredicted RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 ZCCHC23Q6ZST2 131 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 KLHL5Q96PQ7 755 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms