RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ARRDC2Q8TBH0 407 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 GPBAR1Q8TDU6 330 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 ZDHHC1Q8WTX9 485 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 SCAMP4Q969E2 229 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 FATE1Q969F0 183 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 LIN37Q96GY3 246 aaPredicted RBP19.46■□□□□ 0.71
LIME1-201ENST00000309546 STRADBQ9C0K7 418 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 PCDH9Q9HC56 1237 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 SPATS2LQ9NUQ6 558 aaKnown RBP19.46■□□□□ 0.71
LIME1-201ENST00000309546 WDR70Q9NW82 654 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 ZFC3H1O60293 1989 aaKnown RBP19.45■□□□□ 0.7
LIME1-201ENST00000309546 KCNK1O00180 336 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 APOL1O14791 398 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 SOD1P00441 154 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 JCHAINP01591 159 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 FUCA1P04066 466 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 TNNT1P13805 278 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 CD86P42081 329 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 PTSQ03393 145 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 DPTQ07507 201 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 ODF2Q5BJF6 829 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 SPRED1Q7Z699 444 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 NRROSQ86YC3 692 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 RHOT2Q8IXI1 618 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 PLD5Q8N7P1 536 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 TMEM74Q96NL1 305 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 MAK16Q9BXY0 300 aaKnown RBP19.45■□□□□ 0.7
LIME1-201ENST00000309546 TRNAU1APQ9NX07 287 aaKnown RBP19.45■□□□□ 0.7
LIME1-201ENST00000309546 TAAR2Q9P1P5 351 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 APPL1Q9UKG1 709 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 DNPEPQ9ULA0 475 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 SLC17A4Q9Y2C5 497 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 TMEM98Q9Y2Y6 226 aa19.45■□□□□ 0.7
LIME1-201ENST00000309546 TMX2-CTNND1H3BSU7 103 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 PLD2O14939 933 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 INPP4BO15327 924 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 CLDN7O95471 211 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 IVLP07476 585 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 ARHGAP25P42331 645 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 STC1P52823 247 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 TMPRSS3P57727 454 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 CTBSQ01459 385 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 PPIDQ08752 370 aaKnown RBP19.44■□□□□ 0.7
LIME1-201ENST00000309546 AP1B1Q10567 949 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 ZBTB17Q13105 803 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 BIRC2Q13490 618 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 MAP9Q49MG5 647 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 FAM182AQ5T1J6 154 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 ADAMTSL4Q6UY14 1074 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 MARK2Q7KZI7 788 aaKnown RBP19.44■□□□□ 0.7
LIME1-201ENST00000309546 RAB11FIP2Q7L804 512 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 RFX6Q8HWS3 928 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 FBXO39Q8N4B4 442 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 OR2M4Q96R27 311 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 AGAP2Q99490 1192 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 ANP32EQ9BTT0 268 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 RIOK2Q9BVS4 552 aaKnown RBP19.44■□□□□ 0.7
LIME1-201ENST00000309546 CEP41Q9BYV8 373 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 CDH19Q9H159 772 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 CPNE5Q9HCH3 593 aa19.44■□□□□ 0.7
LIME1-201ENST00000309546 IGSF10Q6WRI0 2623 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 SCN8AQ9UQD0 1980 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 C1orf232A0A0U1RR37 186 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 RHPN2P1A8MT19 583 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 CDRT15L2A8MXV6 281 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 NUDT21O43809 227 aaKnown RBP19.43■□□□□ 0.7
LIME1-201ENST00000309546 PRLP01236 227 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 FGF1P05230 155 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 ITGA2BP08514 1039 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 HGFP14210 728 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 PNLIPP16233 465 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 ADCY8P40145 1251 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 ACTR1BP42025 376 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 ACTR1AP61163 376 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 DYNLT1P63172 113 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 EIF3IQ13347 325 aaKnown RBP19.43■□□□□ 0.7
LIME1-201ENST00000309546 AMZ1Q400G9 498 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 NPNTQ6UXI9 565 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 ZNF765Q7L2R6 523 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 JAMLQ86YT9 394 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 CNGA4Q8IV77 575 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 RNF25Q96BH1 459 aaPredicted RBP19.43■□□□□ 0.7
LIME1-201ENST00000309546 SEPT10Q9P0V9 454 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 PLEKHM1Q9Y4G2 1056 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 HYOU1Q9Y4L1 999 aa19.43■□□□□ 0.7
LIME1-201ENST00000309546 C3orf70A6NLC5 250 aaPredicted RBP19.42■□□□□ 0.7
LIME1-201ENST00000309546 AKR1B15C9JRZ8 316 aaPredicted RBP19.42■□□□□ 0.7
LIME1-201ENST00000309546 MTA2O94776 668 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 ASMTLO95671 621 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 ECEL1O95672 775 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 PYGLP06737 847 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 MMP2P08253 660 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 JMJD7P0C870 316 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 ALDH4A1P30038 563 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 CCKBRP32239 447 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 UGT1A5P35504 534 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 MLLT3P42568 568 aaPredicted RBP19.42■□□□□ 0.7
LIME1-201ENST00000309546 UCNP55089 124 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 RPL26P61254 145 aaKnown RBP19.42■□□□□ 0.7
LIME1-201ENST00000309546 IFI35P80217 286 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms