RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 NETO2Q8NC67 525 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 ASB12Q8WXK4 309 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 PTPRN2Q92932 1015 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 ISG20Q96AZ6 181 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 OLFM3Q96PB7 478 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 RSRP1Q9BUV0 290 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 FOXP3Q9BZS1 431 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 NSRP1Q9H0G5 558 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 STMN4Q9H169 189 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 CARD9Q9H257 536 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 PRSS16Q9NQE7 514 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 POLR3BQ9NW08 1133 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 SPATA6Q9NWH7 488 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 TBC1D29Q9UFV1 150 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 IPO11Q9UI26 975 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 A0A087X0M5 115 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 EDDM13A0A1B0GTR0 161 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 A0A1B0GX30 115 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 K7ERQ8 282 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 LAMTOR5O43504 91 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 GALR2O43603 387 aaPredicted RBP8.28□□□□□ -1.08
CHD6-201ENST00000309279 SYNCRIPO60506 623 aaKnown RBP8.28□□□□□ -1.08
CHD6-201ENST00000309279 TJP3O95049 919 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 POLBP06746 335 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 EPHX1P07099 455 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 HLA-EP13747 358 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 COL9A1P20849 921 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 TGM2P21980 687 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 MSNP26038 577 aaKnown RBP8.28□□□□□ -1.08
CHD6-201ENST00000309279 IDUAP35475 653 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 CETN2P41208 172 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 WASP42768 502 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 CCT8P50990 548 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 KLF1Q13351 362 aaPredicted RBP8.28□□□□□ -1.08
CHD6-201ENST00000309279 RFTN1Q14699 578 aaPredicted RBP8.28□□□□□ -1.08
CHD6-201ENST00000309279 LLGL1Q15334 1064 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 AADACL4Q5VUY2 407 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 AADACL2Q6P093 401 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 BZW1Q7L1Q6 419 aaKnown RBP8.28□□□□□ -1.08
CHD6-201ENST00000309279 OR8H3Q8N146 312 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 SLC35F6Q8N357 371 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 HDAC11Q96DB2 347 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 ZNF599Q96NL3 588 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 TCF12Q99081 682 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 CCDC106Q9BWC9 280 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 BRD8Q9H0E9 1235 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 GHITMQ9H3K2 345 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 EXTL2Q9UBQ6 330 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 EBF1Q9UH73 591 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 FBXO4Q9UKT5 387 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 SLC8A2Q9UPR5 921 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 ACTL7AQ9Y615 435 aa8.28□□□□□ -1.08
CHD6-201ENST00000309279 EML5Q05BV3 1969 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 LRRC14BA6NHZ5 514 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 B2RBV5 119 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 APOC4-APOC2K7ER74 178 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 URI1O94763 535 aaPredicted RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 TRIM16O95361 564 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 APOC2P02655 101 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 COL6A2P12110 1019 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 VAV1P15498 845 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 PECAM1P16284 738 aaPredicted RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 PRKAR1BP31321 381 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 CCNFP41002 786 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 RUNX1T1Q06455 604 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 PPIDQ08752 370 aaKnown RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 SLC14A1Q13336 389 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 HNRNPDQ14103 355 aaKnown RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 ELAVL3Q14576 367 aaKnown RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 STARD3Q14849 445 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 PDK1Q15118 436 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 CYTH1Q15438 398 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 ZNF528Q3MIS6 628 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 CCDC38Q502W7 563 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 TIGD7Q6NT04 549 aaPredicted RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 C22orf39Q6P5X5 142 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 CEP97Q8IW35 865 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 FANCMQ8IYD8 2048 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 SYTL1Q8IYJ3 562 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 ATPAF2Q8N5M1 289 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 TEX26Q8N6G2 289 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 PCDH20Q8N6Y1 951 aaKnown RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 ZNF366Q8N895 744 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 OR2A12Q8NGT7 310 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 OR2T3Q8NH03 318 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 P3H4Q92791 437 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 PSKH2Q96QS6 385 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 PRRX2Q99811 253 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 ACAT2Q9BWD1 397 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 HEMGNQ9BXL5 484 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 MKRN2Q9H000 416 aaKnown RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 MTG2Q9H4K7 406 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 SP110Q9HB58 689 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 ARFGAP3Q9NP61 516 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 WASH6PQ9NQA3 447 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 UBP1Q9NZI7 540 aa8.27□□□□□ -1.09
CHD6-201ENST00000309279 SAE1Q9UBE0 346 aaPredicted RBP8.27□□□□□ -1.09
CHD6-201ENST00000309279 UBA2Q9UBT2 640 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms