RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 NT5MQ9NPB1 228 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 TMEM9Q9P0T7 183 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 PSME2Q9UL46 239 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ANK1P16157 1881 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 DLGAP1O14490 977 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 GSTA4O15217 222 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 CHEK2O96017 543 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 AIF1P55008 147 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 SH3BP2P78314 561 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ECT2LQ008S8 904 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 CYBRD1Q53TN4 286 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF678Q5SXM1 525 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF773Q6PK81 442 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 CRTC3Q6UUV7 619 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 PARP8Q8N3A8 854 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 STON2Q8WXE9 905 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 PPP1R10Q96QC0 940 aaKnown RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 SLC2A13Q96QE2 648 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 PDGFDQ9GZP0 370 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 PIM2Q9P1W9 311 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 TBC1D4O60343 1298 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 MAN1A2O60476 641 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ADAM23O75077 832 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 DEAF1O75398 565 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 E2F6O75461 281 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 FAM163BP0C2L3 166 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 CCR1P32246 355 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 PCYT1AP49585 367 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 LILRA4P59901 499 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 GSTM4Q03013 218 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 PIGFQ07326 219 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 GPRIN1Q7Z2K8 1008 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 C8orf59Q8N0T1 100 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF555Q8NEP9 628 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 NSUN5Q96P11 429 aaKnown RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 FCRL5Q96RD9 977 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 MCMBPQ9BTE3 642 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 RNF39Q9H2S5 420 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ELP3Q9H9T3 547 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 FNDC3AQ9Y2H6 1198 aaKnown RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 M0R3G1 203 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 SOCS7O14512 581 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 SLC25A27O95847 323 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 HLA-DQB2P05538 268 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 HSD17B1P14061 328 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 FOXA1P55317 472 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 CHRNB3Q05901 458 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 UNC50Q53HI1 259 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 TMEM53Q6P2H8 277 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 IGFN1Q86VF2 1251 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 CNTN4Q8IWV2 1026 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 MINDY1Q8N5J2 469 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 SMG8Q8ND04 991 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 SNX19Q92543 992 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 HPS1Q92902 700 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 MAF1Q9H063 256 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 HMG20AQ9NP66 347 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 INTS10Q9NVR2 710 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF229Q9UJW7 825 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 NUDT5Q9UKK9 219 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 BAG5Q9UL15 447 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 CNOT3O75175 753 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 FYNP06241 537 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 SERPINH1P50454 418 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 RBBP7Q16576 425 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 FSCN1Q16658 493 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 TWF2Q6IBS0 349 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 KIAA0408Q6ZU52 694 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 CHPT1Q8WUD6 406 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 NT5C3BQ969T7 300 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 LHPPQ9H008 270 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 SPC25Q9HBM1 224 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 USP22Q9UPT9 525 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 ERGIC3Q9Y282 383 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 KPNA6O60684 536 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 CDK14O94921 469 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 IDO1P14902 403 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 HOXA11P31270 313 aaPredicted RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 ADCYAP1R1P41586 468 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 KCNC1P48547 511 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 HCAR3P49019 387 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 CXCR3P49682 368 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 HERVK_113P63132 956 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 SOX4Q06945 474 aaPredicted RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 GLYATQ6IB77 296 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 FAM117BQ6P1L5 589 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 TAC4Q86UU9 113 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 DCP1BQ8IZD4 617 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 DCBLD1Q8N8Z6 715 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 ITFG1Q8TB96 612 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 PNPT1Q8TCS8 783 aaKnown RBP11.12□□□□□ -0.63
PTPN7-201ENST00000309017 MAGED4Q96JG8 741 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 ERVK-6Q9BXR3 956 aa11.12□□□□□ -0.63
PTPN7-201ENST00000309017 CLDN25C9JDP6 229 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 PIRO00625 290 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 SNX2O60749 519 aa11.11□□□□□ -0.63
PTPN7-201ENST00000309017 THRBP10828 461 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms