RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 WDR81Q562E7 1941 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ZBTB42B2RXF5 422 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 IFNA14P01570 189 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 IFNA16P05015 189 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 RRM2P31350 389 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CDH5P33151 784 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 INPP1P49441 399 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 DPYSQ14117 519 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 C5orf22Q49AR2 442 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PMF1Q6P1K2 205 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CORO6Q6QEF8 472 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 KRT73Q86Y46 540 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PQLC3Q8N755 202 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PTCD2Q8WV60 388 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 FBXL20Q96IG2 436 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 HPDLQ96IR7 371 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 NPAS2Q99743 824 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ELOVL6Q9H5J4 265 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 DHX35Q9H5Z1 703 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 POPDC2Q9HBU9 364 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 DNAJC11Q9NVH1 559 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CCDC59Q9P031 241 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 TBC1D30Q9Y2I9 924 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CDY2AQ9Y6F7 541 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CDY1Q9Y6F8 540 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 MRPL42Q9Y6G3 142 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 A0A087WZ62 844 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 H0YJX3 145 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PPEF2O14830 753 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 DHRS4L1P0CG22 281 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ACAT1P24752 427 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 EVI2BP34910 448 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 IDUAP35475 653 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ZNF484Q5JVG2 852 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 GLRA4Q5JXX5 417 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 METTL7BQ6UX53 244 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 LYSMD3Q7Z3D4 306 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PYROXD2Q8N2H3 581 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 RNF157Q96PX1 679 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 FDXACB1Q9BRP7 624 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CCDC106Q9BWC9 280 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 TEX12Q9BXU0 123 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 SOX17Q9H6I2 414 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PLLPQ9Y342 182 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CCDC78A2IDD5 438 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 SYNCRIPO60506 623 aaKnown RBP10.46□□□□□ -0.73
MSRB3-201ENST00000308259 RFPL1O75677 317 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 MED26O95402 600 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 FASP25445 335 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 OR3A3P47888 321 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 BNIP2Q12982 314 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 GOLGA7BQ2TAP0 167 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 ALFQ53S48 1182 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 PPM1JQ5JR12 505 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 ZFP90Q8TF47 636 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 SNAPC3Q92966 411 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 SH3YL1Q96HL8 342 aaPredicted RBP10.46□□□□□ -0.73
MSRB3-201ENST00000308259 RANBP9Q96S59 729 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 SLC2A11Q9BYW1 496 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 NUAK2Q9H093 628 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 TRIM45Q9H8W5 580 aaPredicted RBP10.46□□□□□ -0.73
MSRB3-201ENST00000308259 GTSE1Q9NYZ3 720 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 RNF11Q9Y3C5 154 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 PCDHGA10Q9Y5H3 936 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 STON1Q9Y6Q2 735 aa10.46□□□□□ -0.73
MSRB3-201ENST00000308259 COL11A1P12107 1806 aaPredicted RBP10.46□□□□□ -0.73
MSRB3-201ENST00000308259 WDR27A2RRH5 827 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 HEATR9A2RTY3 570 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 HMX2A2RU54 273 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 HTRA2O43464 458 aaPredicted RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 RALBP11234 206 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 MSH3P20585 1137 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 ALDH3B2P48448 385 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 GDI2P50395 445 aaKnown RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 ZNF143P52747 638 aaPredicted RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 ABATP80404 500 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 TAGLNQ01995 201 aaKnown RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 SLC10A2Q12908 348 aaPredicted RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 Q3C1V9 767 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 N4BP2L1Q5TBK1 243 aaPredicted RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 TMEM236Q5W0B7 351 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 RORBQ92753 470 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 CDKL2Q92772 493 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 IL12RB2Q99665 862 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 SNRNP25Q9BV90 132 aaKnown RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 WDR55Q9H6Y2 383 aaPredicted RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 CREBZFQ9NS37 354 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 RIC8BQ9NVN3 520 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 ZNF358Q9NW07 568 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 SAGE2PA6NJ88 616 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 CILPO75339 1184 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 MT-ND1P03886 318 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 AOC1P19801 751 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 GTF2E2P29084 291 aaKnown RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 SNRPD2P62316 118 aaKnown RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 TRAF3Q13114 568 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 PPP1R26Q5T8A7 1209 aaPredicted RBP10.46□□□□□ -0.74
MSRB3-201ENST00000308259 GARNL3Q5VVW2 1013 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 ARMCX2Q7L311 632 aa10.46□□□□□ -0.74
MSRB3-201ENST00000308259 BCL7CQ8WUZ0 217 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms