RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RBM34P42696 430 aaKnown RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 BLMHQ13867 455 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 GRK1Q15835 563 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 NEDD1Q8NHV4 660 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 EZH1Q92800 747 aaPredicted RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 ACTL7BQ9Y614 415 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 KCNJ2P63252 427 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 HLFQ16534 295 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 CADM2Q8N3J6 435 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 C16orf58Q96GQ5 468 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 LIN37Q96GY3 246 aaPredicted RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 BPIFA1Q9NP55 256 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 BLOC1S4Q9NUP1 217 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 GPR89AB7ZAQ6 455 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 GPR89BP0CG08 455 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 IDO1P14902 403 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 RAB4AP20338 218 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 OR52J3Q8NH60 311 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 RBM4BQ9BQ04 359 aaKnown RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 RBM4Q9BWF3 364 aaKnown RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 MOV10Q9HCE1 1003 aaKnown RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF451Q9Y4E5 1061 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 NOTOA8MTQ0 251 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 CD83Q01151 205 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF792Q3KQV3 632 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 GPRC5CQ9NQ84 441 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 HYKKA2RU49 373 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 HGFP14210 728 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF16P17020 682 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 NR4A1P22736 598 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 MSX2P35548 267 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ARSHQ5FYA8 562 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 SDR16C5Q8N3Y7 309 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 C12orf43Q96C57 262 aaKnown RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 SLC7A6OSQ96CW6 309 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 MXRA8Q9BRK3 442 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 FARSAQ9Y285 508 aaKnown RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 RFKQ969G6 155 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 PPCDCQ96CD2 204 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 PCDHA11Q9Y5I1 949 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 EME2A4GXA9 379 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 GSG1L2A8MUP6 293 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 MAPK14Q16539 360 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 UAP1L1Q3KQV9 507 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 BEND4Q6ZU67 534 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 RELTQ969Z4 430 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 TUBE1Q9UJT0 475 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 PVALBP20472 110 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 TLR1Q15399 786 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ENGASEQ8NFI3 743 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 DNMT3LQ9UJW3 386 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 SLC6A9P48067 706 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ILF2Q12905 390 aaKnown RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 TMC8Q8IU68 726 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 FUKQ8N0W3 1084 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 GLT1D1Q96MS3 346 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 MAP2P11137 1827 aaKnown RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 RETSATQ6NUM9 610 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 LGR4Q9BXB1 951 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 BRD9Q9H8M2 597 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 IFT52Q9Y366 437 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 TBC1D3BA6NDS4 549 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 DCDC2CA8MYV0 355 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 TPST2O60704 377 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ARCN1P48444 511 aaKnown RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 SMARCB1Q12824 385 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 UBAP2Q5T6F2 1119 aaKnown RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ALYREFQ86V81 257 aaKnown RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 TMEM161BQ8NDZ6 487 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 TRHDEQ9UKU6 1024 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 SNCAIPQ9Y6H5 919 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF705EA8MWA4 302 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 SEPT4O43236 478 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 MICAL2O94851 1124 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 KAT7O95251 611 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF12P17014 697 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ERGIC2Q96RQ1 377 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF518BQ9C0D4 1074 aa13.37□□□□□ -0.27
TRIM56-201ENST00000306085 FBXO6Q9NRD1 293 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-201ENST00000306085 RASGRP1O95267 797 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 INTS6LQ5JSJ4 861 aaKnown RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 CPTPQ5TA50 214 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 MPZL3Q6UWV2 235 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SYVN1Q86TM6 617 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 GALNT11Q8NCW6 608 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 DPF3Q92784 378 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 BRINP2Q9C0B6 783 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 A0A087X0B3 334 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SSX4O60224 188 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 AMPD1P23109 780 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF611Q8N823 705 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 PCDH18Q9HCL0 1135 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 DDX43Q9NXZ2 648 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms