RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 FZD3Q9NPG1 666 aa27.05■■□□□ 1.92
HDAC3-201ENST00000305264 IL26Q9NPH9 171 aa27.05■■□□□ 1.92
HDAC3-201ENST00000305264 IL1RAPL1Q9NZN1 696 aa27.05■■□□□ 1.92
HDAC3-201ENST00000305264 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.05■■□□□ 1.92
HDAC3-201ENST00000305264 THADAQ6YHU6 1953 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 GAPDHSO14556 408 aaPredicted RBP27.04■■□□□ 1.92
HDAC3-201ENST00000305264 SLC31A1O15431 190 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 MAP3K13O43283 966 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 POLBP06746 335 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 ARNTP27540 789 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 SPAM1P38567 509 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 HADHAP40939 763 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 CCR5P51681 352 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 SGCGQ13326 291 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 STEAP4Q687X5 459 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 FAM151BQ6UXP7 276 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 CEP128Q6ZU80 1094 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 RELL1Q8IUW5 271 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 CCNJLQ8IV13 435 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 PELI3Q8N2H9 469 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 CDKN2AIPNLQ96HQ2 116 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 CDC42EP4Q9H3Q1 356 aaKnown RBP27.04■■□□□ 1.92
HDAC3-201ENST00000305264 ZSCAN32Q9NX65 697 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 RAD51BO15315 384 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 GPR39O43194 453 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 DCDC1P59894 354 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 AGERQ15109 404 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 RAVER1Q8IY67 606 aaKnown RBP27.04■■□□□ 1.92
HDAC3-201ENST00000305264 TMEFF1Q8IYR6 380 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 NRSN1Q8IZ57 195 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 UNC5BQ8IZJ1 945 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 AENQ8WTP8 325 aaKnown RBP27.04■■□□□ 1.92
HDAC3-201ENST00000305264 HDAC10Q969S8 669 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 PLEKHG4BQ96PX9 1271 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 MYOCQ99972 504 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 C19orf43Q9BQ61 176 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 RIOK2Q9BVS4 552 aaKnown RBP27.04■■□□□ 1.92
HDAC3-201ENST00000305264 FAM83DQ9H4H8 585 aa27.04■■□□□ 1.92
HDAC3-201ENST00000305264 SPAG17Q6Q759 2223 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 RGSL1A5PLK6 1076 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 OR51F1A6NGY5 319 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 HRO43593 1189 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 TTC4O95801 387 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 TUBBP07437 444 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 XIAPP98170 497 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 PEX6Q13608 980 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 HENMT1Q5T8I9 393 aaKnown RBP27.03■■□□□ 1.92
HDAC3-201ENST00000305264 SLC41A1Q8IVJ1 513 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 CADM4Q8NFZ8 388 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 SNX19Q92543 992 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 AP2M1Q96CW1 435 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 TXLNGYQ9BZA5 131 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 NINJ2Q9NZG7 142 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 NFKBIL1Q9UBC1 381 aaPredicted RBP27.03■■□□□ 1.92
HDAC3-201ENST00000305264 DMDP11532 3685 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 GON4LQ3T8J9 2241 aa27.03■■□□□ 1.92
HDAC3-201ENST00000305264 CCDC162PA2VCL2 907 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 SSTR1P30872 391 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 GPX6P59796 221 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 SLMAPQ14BN4 828 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 WSCD2Q2TBF2 565 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 KIAA0930Q6ICG6 404 aaPredicted RBP27.02■■□□□ 1.92
HDAC3-201ENST00000305264 KDM7AQ6ZMT4 941 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 TP53I13Q8NBR0 393 aaPredicted RBP27.02■■□□□ 1.92
HDAC3-201ENST00000305264 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.02■■□□□ 1.92
HDAC3-201ENST00000305264 ZBTB44Q8NCP5 570 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 HSPA12BQ96MM6 686 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 AGAP2Q99490 1192 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 KLF6Q99612 283 aaPredicted RBP27.02■■□□□ 1.92
HDAC3-201ENST00000305264 PCED1AQ9H1Q7 454 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 LRRC4CQ9HCJ2 640 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 MBNL1Q9NR56 388 aaKnown RBP27.02■■□□□ 1.92
HDAC3-201ENST00000305264 GLYATL1P3A0A0U1RQE8 302 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 METTL12A8MUP2 240 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 H7C0S8 307 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 K7ESM1 405 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 VAPBO95292 243 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 NUBP1P53384 320 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 PRAMEP78395 509 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 IRF4Q15306 451 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 KYNUQ16719 465 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 SETMARQ53H47 684 aaPredicted RBP27.02■■□□□ 1.92
HDAC3-201ENST00000305264 SPANXN3Q5MJ09 141 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 ZNF765Q7L2R6 523 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 PALM2Q8IXS6 379 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 SEMA4AQ9H3S1 761 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 FAM169AQ9Y6X4 670 aa27.02■■□□□ 1.92
HDAC3-201ENST00000305264 PRAMEF1O95521 474 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 MC4RP32245 332 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 ARCN1P48444 511 aaKnown RBP27.01■■□□□ 1.91
HDAC3-201ENST00000305264 LRRC14Q15048 493 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 ZDHHC20Q5W0Z9 365 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 PLA2G15Q8NCC3 412 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 OR6P1Q8NGX9 317 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 ASB12Q8WXK4 309 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 CENPTQ96BT3 561 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 RAD18Q9NS91 495 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 PLXNB3Q9ULL4 1909 aa27.01■■□□□ 1.91
HDAC3-201ENST00000305264 SDK1Q7Z5N4 2213 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms