RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 DENND2DQ9H6A0 471 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 XPR1Q9UBH6 696 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TRAV19A0A0A6YYK7 116 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 UBE2Q2LH0YL09 131 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TIE1P35590 1138 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CTSKP43235 329 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF157P51786 506 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 IL18R1Q13478 541 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 LAPTM5Q13571 262 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ADGRE1Q14246 886 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 SLC25A52Q3SY17 297 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 PARP15Q460N3 678 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 SLC30A10Q6XR72 485 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TOP6BLQ8N6T0 577 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GLB1L3Q8NCI6 653 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 MKL1Q969V6 931 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 OSMRQ99650 979 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 NUSAP1Q9BXS6 441 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 NCKAP1Q9Y2A7 1128 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 FGF19O95750 216 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 LINC00032P0C843 101 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ATP5C1P36542 298 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 RPS9P46781 194 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 C16orf46Q6P387 395 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 DEF8Q6ZN54 512 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ZZZ3Q8IYH5 903 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GSTCDQ8NEC7 633 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 EZH1Q92800 747 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 PPCDCQ96CD2 204 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ALG2Q9H553 416 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ZFYVE1Q9HBF4 777 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GNEQ9Y223 722 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 FAM240BA0A1B0GVZ2 78 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 RIIAD1A6NNX1 92 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 MAGEB3O15480 346 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 METTL18O95568 372 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ASLP04424 464 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 PEPDP12955 493 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ALDH4A1P30038 563 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 JAM2P57087 298 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CDK18Q07002 472 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 MYBPC3Q14896 1274 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ACAP2Q15057 778 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GALNT15Q8N3T1 639 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 LRRC52Q8N7C0 313 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ARL10Q8N8L6 244 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 SUN5Q8TC36 379 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 RIT1Q92963 219 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 BHMTQ93088 406 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF347Q96SE7 839 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 RASSF1Q9NS23 344 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 EXD2Q9NVH0 621 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 RGPD8O14715 1765 aaPredicted RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PRR5-ARHGAP8B1AHC4 643 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PITPNM1O00562 1244 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 RPL4P36578 427 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CLCN2P51788 898 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 HADHBP55084 474 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CYP4F2P78329 520 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ABATP80404 500 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ARHGAP8P85298 464 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CYP4F3Q08477 520 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ITGA7Q13683 1181 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 FAM182BQ5T319 152 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PLPPR4Q7Z2D5 763 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 IRF2BP2Q7Z5L9 587 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 TNS4Q8IZW8 715 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 NKD2Q969F2 451 aaPredicted RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 DNAJC19Q96DA6 116 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 FAM163AQ96GL9 167 aaPredicted RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 BRD9Q9H8M2 597 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ARL8BQ9NVJ2 186 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 STOX2Q9P2F5 926 aaPredicted RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CXCL11O14625 94 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 LSM1O15116 133 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 GRIN3BO60391 1043 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PSMD10O75832 226 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 IFNA7P01567 189 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 TRBC1P01850 177 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 RPLP0P05388 317 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 SRPRAP08240 638 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ARPC4P59998 168 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 NUP188Q5SRE5 1749 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 REP15Q6BDI9 236 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 INTS5Q6P9B9 1019 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 BEND5Q7L4P6 421 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 RBM15BQ8NDT2 890 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ACER1Q8TDN7 264 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 TAMM41Q96BW9 452 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 DUSP16Q9BY84 665 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PDCD5O14737 125 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 RECQL4O94761 1208 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PRKAR2AP13861 404 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 KLRK1P26718 216 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 TMEM161BQ8NDZ6 487 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 YME1L1Q96TA2 773 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 MGME1Q9BQP7 344 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 IDI2Q9BXS1 227 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CAB39LQ9H9S4 337 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 SUCOQ9UBS9 1254 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms