RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 ACOX1Q15067 660 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 SPA17Q15506 151 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 CFAP58Q5T655 872 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 ENPP7Q6UWV6 458 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 ZNF438Q7Z4V0 828 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 TMC3Q7Z5M5 1100 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 DAAM2Q86T65 1068 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 RFX6Q8HWS3 928 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 FSTL5Q8N475 847 aaPredicted RBP11.22□□□□□ -0.61
CLCC1-201ENST00000302500 KYQ8NBH2 561 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 CCNYQ8ND76 341 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 MDM1Q8TC05 714 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 NSMCE1Q8WV22 266 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 HES6Q96HZ4 224 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 MRGPRX2Q96LB1 330 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 AGAP3Q96P47 875 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 TMEM168Q9H0V1 697 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 WDR26Q9H7D7 661 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 KCTD5Q9NXV2 234 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 OAS3Q9Y6K5 1087 aaKnown RBP11.22□□□□□ -0.61
CLCC1-201ENST00000302500 A0A1W2PQM1 296 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 CCDC66A2RUB6 948 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 A6NCN8 305 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 IVLP07476 585 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 NFKB1P19838 968 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 ADRA1AP35348 466 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 POLD2P49005 469 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 BLKP51451 505 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 DCDC1P59894 354 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 AP1B1Q10567 949 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 TARDBPQ13148 414 aaKnown RBP eCLIP11.21□□□□□ -0.615e-6■□□□□ 8.4
CLCC1-201ENST00000302500 GALNT3Q14435 633 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 HLTFQ14527 1009 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLCC1-201ENST00000302500 XKR5Q6UX68 686 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 ZNF662Q6ZS27 426 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 LYSMD3Q7Z3D4 306 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 HID1Q8IV36 788 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 NRSN1Q8IZ57 195 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 TTC30BQ8N4P2 665 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLCC1-201ENST00000302500 GPR26Q8NDV2 337 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 LPCAT1Q8NF37 534 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 ACTL9Q8TC94 416 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 TFB1MQ8WVM0 346 aaKnown RBP11.21□□□□□ -0.61
CLCC1-201ENST00000302500 RBM41Q96IZ5 413 aaKnown RBP11.21□□□□□ -0.61
CLCC1-201ENST00000302500 FCRL5Q96RD9 977 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 MLPHQ9BV36 600 aaPredicted RBP11.21□□□□□ -0.61
CLCC1-201ENST00000302500 OSBPL8Q9BZF1 889 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 C10orf88Q9H8K7 445 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 MAGEE1Q9HCI5 957 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 TRNAU1APQ9NX07 287 aaKnown RBP11.21□□□□□ -0.61
CLCC1-201ENST00000302500 KLQ9UEF7 1012 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 CD84Q9UIB8 345 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 PCDHB1Q9Y5F3 818 aa11.21□□□□□ -0.61
CLCC1-201ENST00000302500 AHCTF1Q8WYP5 2266 aa11.21□□□□□ -0.62
CLCC1-201ENST00000302500 TCRBV7S2A1N4TA0A589 114 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 HACD1B0YJ81 288 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 KALRNO60229 2985 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 EPOP01588 193 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 TNNT1P13805 278 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 CCZ1BP86790 482 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 CCZ1P86791 482 aaPredicted RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 OTUD4Q01804 1114 aaKnown RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 CDK18Q07002 472 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 KHDC1Q4VXA5 237 aaKnown RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 PYCR3Q53H96 274 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 FAXCQ5TGI0 409 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 KAZNQ674X7 775 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 DENND5AQ6IQ26 1287 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 IGF2-ASQ6U949 168 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 TMPRSS9Q7Z410 1059 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 ARL10Q8N8L6 244 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 IFI44Q8TCB0 444 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 HTR3CQ8WXA8 447 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 HAUS1Q96CS2 278 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 AP2M1Q96CW1 435 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 RIOK2Q9BVS4 552 aaKnown RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 HEMGNQ9BXL5 484 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 SLC13A1Q9BZW2 595 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 NRSN2Q9GZP1 204 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 SPATS2LQ9NUQ6 558 aaKnown RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 APPL1Q9UKG1 709 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 DNPEPQ9ULA0 475 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 SUFUQ9UMX1 484 aa11.2□□□□□ -0.62
CLCC1-201ENST00000302500 PACSIN2Q9UNF0 486 aaPredicted RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 SPENQ96T58 3664 aaKnown RBP11.2□□□□□ -0.62
CLCC1-201ENST00000302500 PMS2P1A4D2B8 440 aa11.19□□□□□ -0.62
CLCC1-201ENST00000302500 RGSL1A5PLK6 1076 aa11.19□□□□□ -0.62
CLCC1-201ENST00000302500 CACNB4O00305 520 aaPredicted RBP11.19□□□□□ -0.62
CLCC1-201ENST00000302500 TLX3O43711 291 aaPredicted RBP11.19□□□□□ -0.62
CLCC1-201ENST00000302500 DXOO77932 396 aaKnown RBP11.19□□□□□ -0.62
CLCC1-201ENST00000302500 NDST3O95803 873 aa11.19□□□□□ -0.62
CLCC1-201ENST00000302500 EML2O95834 649 aa11.19□□□□□ -0.62
CLCC1-201ENST00000302500 MT-CO3P00414 261 aa11.19□□□□□ -0.62
CLCC1-201ENST00000302500 FGF1P05230 155 aa11.19□□□□□ -0.62
CLCC1-201ENST00000302500 PIRTP0C851 137 aa11.19□□□□□ -0.62
CLCC1-201ENST00000302500 ALPPL2P10696 532 aa11.19□□□□□ -0.62
CLCC1-201ENST00000302500 HTR1BP28222 390 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms