RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PGM2L1Q6PCE3 622 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 ABTB1Q969K4 478 aaPredicted RBP21.91■■□□□ 1.1
TPM4-201ENST00000300933 PHF12Q96QT6 1004 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 PTTG2Q9NZH5 202 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 SSX2IPQ9Y2D8 614 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 UNC80Q8N2C7 3258 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 LRRC14BA6NHZ5 514 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 H3BNX3 289 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 PAPSS2O95340 614 aaPredicted RBP21.9■■□□□ 1.1
TPM4-201ENST00000300933 EFEMP2O95967 443 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 PIM1P11309 404 aaPredicted RBP21.9■■□□□ 1.1
TPM4-201ENST00000300933 ITGAXP20702 1163 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 ITGB8P26012 769 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 SMAD3P84022 425 aaKnown RBP21.9■■□□□ 1.1
TPM4-201ENST00000300933 PRKAA1Q13131 559 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 ADGRF1Q5T601 910 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 IYDQ6PHW0 289 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 B3GNT6Q6ZMB0 384 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 TMEM150AQ86TG1 271 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 KDM1BQ8NB78 822 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 BRSK1Q8TDC3 778 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 ACTRT2Q8TDY3 377 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 PTERQ96BW5 349 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 ZNF334Q9HCZ1 680 aaPredicted RBP21.9■■□□□ 1.1
TPM4-201ENST00000300933 NCKIPSDQ9NZQ3 722 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.9■■□□□ 1.1
TPM4-201ENST00000300933 SEPT3Q9UH03 358 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 ABLIM3O94929 683 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 PRLP01236 227 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 FGF1P05230 155 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 COX4I1P13073 169 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 HDCP19113 662 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 RPL5P46777 297 aaKnown RBP21.9■■□□□ 1.1
TPM4-201ENST00000300933 CDH13P55290 713 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 TIAL1Q01085 375 aaKnown RBP eCLIP21.9■■□□□ 1.13e-7■■□□□ 12.8
TPM4-201ENST00000300933 AGAP9Q5VTM2 703 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 PIP4K2CQ8TBX8 421 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 WFDC5Q8TCV5 224 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 DCUN1D1Q96GG9 259 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 PSKH2Q96QS6 385 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 TRIB3Q96RU7 358 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 MGME1Q9BQP7 344 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 SCUBE2Q9NQ36 999 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 OGDHLQ9ULD0 1010 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 BACE2Q9Y5Z0 518 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 MICAL3Q7RTP6 2002 aa21.9■■□□□ 1.1
TPM4-201ENST00000300933 PPP6CO00743 305 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 KDELR3O43731 214 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 TBL1XO60907 577 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 ACRP10323 421 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 GJA1P17302 382 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 HLA-DPA1P20036 260 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 ATP5F1P24539 256 aaPredicted RBP21.89■■□□□ 1.1
TPM4-201ENST00000300933 MSX2P35548 267 aaPredicted RBP21.89■■□□□ 1.1
TPM4-201ENST00000300933 MNX1P50219 401 aaPredicted RBP21.89■■□□□ 1.1
TPM4-201ENST00000300933 OR4L1Q8NH43 312 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 JADE3Q92613 823 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 CDKN2AIPNLQ96HQ2 116 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 UBXN10Q96LJ8 280 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 TMEM39AQ9NV64 488 aa21.89■■□□□ 1.1
TPM4-201ENST00000300933 K7ERQ8 282 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 INSIG1O15503 277 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 CLDN11O75508 207 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 NDST3O95803 873 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 SOD2P04179 222 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 FMO4P31512 558 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 HPCAP84074 193 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 ARF5P84085 180 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 ATXN7L2Q5T6C5 722 aaPredicted RBP21.89■■□□□ 1.09
TPM4-201ENST00000300933 CXorf57Q6NSI4 855 aaKnown RBP21.89■■□□□ 1.09
TPM4-201ENST00000300933 GLT6D1Q7Z4J2 308 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 RNF168Q8IYW5 571 aaPredicted RBP21.89■■□□□ 1.09
TPM4-201ENST00000300933 ZFP28Q8NHY6 868 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 COMMD8Q9NX08 183 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 NDUFA13Q9P0J0 144 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 SORCS3Q9UPU3 1222 aa21.89■■□□□ 1.09
TPM4-201ENST00000300933 FCF1Q9Y324 198 aaKnown RBP21.89■■□□□ 1.09
TPM4-201ENST00000300933 H0Y626 953 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 H2AFYO75367 372 aaKnown RBP21.88■■□□□ 1.09
TPM4-201ENST00000300933 XIAPP98170 497 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 ARHGEF6Q15052 776 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 CLEC6AQ6EIG7 209 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 ISCA2Q86U28 154 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 SNX32Q86XE0 403 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 FBXW8Q8N3Y1 598 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 CEP70Q8NHQ1 597 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 KLF16Q9BXK1 252 aaPredicted RBP21.88■■□□□ 1.09
TPM4-201ENST00000300933 CATSPERZQ9NTU4 200 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 NRG2O14511 850 aaPredicted RBP21.88■■□□□ 1.09
TPM4-201ENST00000300933 RPP40O75818 363 aaKnown RBP21.88■■□□□ 1.09
TPM4-201ENST00000300933 SIX3O95343 332 aaPredicted RBP21.88■■□□□ 1.09
TPM4-201ENST00000300933 CD160O95971 181 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 BTG3Q14201 252 aaPredicted RBP21.88■■□□□ 1.09
TPM4-201ENST00000300933 C5orf22Q49AR2 442 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 PDZD8Q8NEN9 1154 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 CMTM5Q96DZ9 223 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 PRPF18Q99633 342 aaKnown RBP21.88■■□□□ 1.09
TPM4-201ENST00000300933 GALPQ9UBC7 116 aa21.88■■□□□ 1.09
TPM4-201ENST00000300933 TSR3Q9UJK0 312 aaKnown RBP21.88■■□□□ 1.09
TPM4-201ENST00000300933 ATP6AP2A0A1C7CYW4 349 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms