RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CCDC80Q76M96 950 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 ATPAF2Q8N5M1 289 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 SCAIQ8N9R8 606 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 PSD4Q8NDX1 1056 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 PSMA8Q8TAA3 256 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 WDCPQ9H6R7 721 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 MARCH7Q9H992 704 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 ABCB10Q9NRK6 738 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 NUDT5Q9UKK9 219 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 DNAJC15Q9Y5T4 150 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 ZNF831Q5JPB2 1677 aa14.65□□□□□ -0.06
COL6A2-201ENST00000300527 EVPLQ92817 2033 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 A0A087X1B8 175 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 PAMP19021 973 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 TCEA1P23193 301 aaKnown RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 ARNTP27540 789 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 OAZ1P54368 228 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 CELF3Q5SZQ8 465 aaKnown RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 DNAJC14Q6Y2X3 702 aaPredicted RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 LARP4Q71RC2 724 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 RAB2BQ8WUD1 216 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 BIRC7Q96CA5 298 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 KIFC1Q9BW19 673 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 GSTO2Q9H4Y5 243 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 HMG20AQ9NP66 347 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 CD320Q9NPF0 282 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 INTS7Q9NVH2 962 aaKnown RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 RCOR3Q9P2K3 495 aaPredicted RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 MTRRQ9UBK8 725 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 GIT1Q9Y2X7 761 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 IGKV6-21A0A0C4DH24 114 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 TSPAN1O60635 241 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 S100BP04271 92 aaPredicted RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 PRKACGP22612 351 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 SLC13A2Q13183 592 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 ROPN1LQ96C74 230 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 SH3YL1Q96HL8 342 aaPredicted RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 FEM1CQ96JP0 617 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 RBM22Q9NW64 420 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 TRHDEQ9UKU6 1024 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 SCN1AP35498 2009 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 FXYD1O00168 92 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 AP3B1O00203 1094 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 PABPC1P11940 636 aaKnown RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 MTPNP58546 118 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 ZNF846Q147U1 533 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 PAGE3Q5JUK9 113 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 HECTD2Q5U5R9 776 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 DCAF15Q66K64 600 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 LINC00523Q86TU6 105 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 FIG4Q92562 907 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 TMBIM1Q969X1 311 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 ZUFSPQ96AP4 578 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 NSMCE2Q96MF7 247 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 NPY6RQ99463 290 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 HOPXQ9BPY8 73 aaPredicted RBP14.64□□□□□ -0.07
COL6A2-201ENST00000300527 BDH2Q9BUT1 245 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 ITM2CQ9NQX7 267 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 SARDHQ9UL12 918 aa14.64□□□□□ -0.07
COL6A2-201ENST00000300527 SOBPA7XYQ1 873 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 TPD52L2O43399 206 aaKnown RBP14.63□□□□□ -0.07
COL6A2-201ENST00000300527 DAB1O75553 588 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 C22orf31O95567 290 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 RBP1P09455 135 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 CYP2C9P11712 490 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 PSMD8P48556 350 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 OR4D2P58180 307 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 BNIP2Q12982 314 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 PSMD5Q16401 504 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 ARL13BQ3SXY8 428 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 UGT3A2Q3SY77 523 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 CYHR1Q6ZMK1 362 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 KRT27Q7Z3Y8 459 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 MICALL2Q8IY33 904 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 C8orf59Q8N0T1 100 aaPredicted RBP14.63□□□□□ -0.07
COL6A2-201ENST00000300527 OR10Q1Q8NGQ4 319 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 ELMO1Q92556 727 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 TEX37Q96LM6 180 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 IL12RB2Q99665 862 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 KLQ9UEF7 1012 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 TMED5Q9Y3A6 229 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 XPNPEP2O43895 674 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 RECQL4O94761 1208 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 THRBP10828 461 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 FCGR1AP12314 374 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 TCF3P15923 654 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 SF3B4Q15427 424 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL6A2-201ENST00000300527 SPESP1Q6UW49 350 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 KIAA2013Q8IYS2 634 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 CLYBLQ8N0X4 340 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 TOR3AQ9H497 397 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 RGPD3A6NKT7 1758 aaPredicted RBP14.63□□□□□ -0.07
COL6A2-201ENST00000300527 RGPD4Q7Z3J3 1758 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 WDR81Q562E7 1941 aa14.63□□□□□ -0.07
COL6A2-201ENST00000300527 SUPT3HB4E1H0 165 aa14.62□□□□□ -0.07
COL6A2-201ENST00000300527 AZIN1O14977 448 aa14.62□□□□□ -0.07
COL6A2-201ENST00000300527 ALDH2P05091 517 aa14.62□□□□□ -0.07
COL6A2-201ENST00000300527 PIRTP0C851 137 aa14.62□□□□□ -0.07
COL6A2-201ENST00000300527 FSHRP23945 695 aa14.62□□□□□ -0.07
COL6A2-201ENST00000300527 IGFBP6P24592 240 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms