RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CHST12Q9NRB3 414 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 BAG5Q9UL15 447 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 ATP11BQ9Y2G3 1177 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 OAS3Q9Y6K5 1087 aaKnown RBP13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 PHIPQ8WWQ0 1821 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 A8MU76 341 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 UPK1AO00322 258 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 TOR1BO14657 336 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 AXIN1O15169 862 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NCAM2O15394 837 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 MTSS1O43312 755 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 THRBP10828 461 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 POLR2EP19388 210 aaKnown RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 BCAT1P54687 386 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 GP2P55259 537 aaKnown RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 POU5F1BQ06416 359 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 CDC20Q12834 499 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 PCID2Q5JVF3 399 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 OTUD3Q5T2D3 398 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 TAF2Q6P1X5 1199 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 PDZD4Q76G19 769 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC22A9Q8IVM8 553 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 KLHDC8BQ8IXV7 354 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 DCP1BQ8IZD4 617 aaKnown RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 C8orf59Q8N0T1 100 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NLGN1Q8N2Q7 840 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NPWQ8N729 165 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 C2CD4AQ8NCU7 369 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 PDZD8Q8NEN9 1154 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 PHF21BQ96EK2 531 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 TXNDC15Q96J42 360 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 CEP295NLQ96MC4 621 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 CYP2S1Q96SQ9 504 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 KCTD14Q9BQ13 255 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 CHID1Q9BWS9 393 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 UBP1Q9NZI7 540 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NAALAD2Q9Y3Q0 740 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NOTOA8MTQ0 251 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 RGS13O14921 159 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 PRSS23O95084 383 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NTRK1P04629 796 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NAT2P11245 290 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 CPB1P15086 417 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 FXNQ16595 210 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 AGAP9Q5VTM2 703 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NEK10Q6ZWH5 1172 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 CATSPER4Q7RTX7 472 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC22A16Q86VW1 577 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 MMAAQ8IVH4 418 aaKnown RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 RIMKLAQ8IXN7 391 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 CHDHQ8NE62 594 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 SEPT1Q8WYJ6 367 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 NT5C3BQ969T7 300 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 VAT1Q99536 393 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 HOXD1Q9GZZ0 328 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 DPEP3Q9H4B8 488 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 CPNE5Q9HCH3 593 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 SDR39U1Q9NRG7 319 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 PRMT7Q9NVM4 692 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 GDAP2Q9NXN4 497 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 PDE10AQ9Y233 779 aa13.48□□□□□ -0.25
RPUSD4-201ENST00000298317 LOC285556D6RIA3 1793 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 C9JVG2 144 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 UBXN8O00124 270 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 AURKAO14965 403 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 DEAF1O75398 565 aaPredicted RBP13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 DAB1O75553 588 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 IMPDH1P20839 514 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 PCMT1P22061 227 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 ACADSBP45954 432 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC12A2P55011 1212 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 LIPEQ05469 1076 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 GEN1Q17RS7 908 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 AASDHQ4L235 1098 aaPredicted RBP13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 RABL3Q5HYI8 236 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 C6orf141Q5SZD1 244 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 ATAD3BQ5T9A4 648 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 UGT3A1Q6NUS8 523 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 ESRP1Q6NXG1 681 aaKnown RBP13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 IFNEQ86WN2 208 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 OR6Q1Q8NGQ2 317 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 L3HYPDHQ96EM0 354 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 TEKT5Q96M29 485 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 TEX13BQ9BXU2 312 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 TTC34A8MYJ7 566 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 FAM72CH0Y354 149 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 NUAK1O60285 661 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 RBP1P09455 135 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 LTA4HP09960 611 aaKnown RBP13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 TCF3P15923 654 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 BDNFP23560 247 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 HRH2P25021 359 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 ECT2LQ008S8 904 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 ZNF678Q5SXM1 525 aa13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 RBM20Q5T481 1227 aaKnown RBP13.47□□□□□ -0.25
RPUSD4-201ENST00000298317 FAM72AQ5TYM5 149 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms