RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 CILP2Q8IUL8 1156 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 RP9Q8TA86 221 aaKnown RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 DDI1Q8WTU0 396 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 LRTOMTQ8WZ04 291 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 SLC39A13Q96H72 371 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 CIB1Q99828 191 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 POLR1EQ9GZS1 481 aaKnown RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 CCDC68Q9H2F9 335 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 ZBTB26Q9HCK0 441 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 ASB1Q9Y576 335 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 TDRD15B5MCY1 1934 aaKnown RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 SPTBN5Q9NRC6 3674 aaKnown RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 ZNF839A8K0R7 811 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 PSMD12O00232 456 aaPredicted RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 BTN3A1O00481 513 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 SMAD6O43541 496 aaKnown RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 LDB2O43679 373 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 NDUFS3O75489 264 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 RNASEH2AO75792 299 aaKnown RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 S1PR4O95977 384 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 APOA4P06727 396 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 ZXDBP98169 803 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 ZNF177Q13360 481 aaPredicted RBP13.51□□□□□ -0.25
TTC39B-201ENST00000297615 SERINC3Q13530 473 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 MTX3Q5HYI7 312 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 DET1Q7L5Y6 550 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 SPRED2Q7Z698 418 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 MYO1HQ8N1T3 1032 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 MDGA1Q8NFP4 955 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 JADE3Q92613 823 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 CENPKQ9BS16 269 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 MTG2Q9H4K7 406 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 IGSF5Q9NSI5 407 aa13.51□□□□□ -0.25
TTC39B-201ENST00000297615 TCAF2A6NFQ2 919 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 UPK3BL1B0FP48 263 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 UPK3BL2E5RIL1 263 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 MTX2O75431 263 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 CKMT2P17540 419 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 ATP5F1P24539 256 aaPredicted RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 IRX1P78414 480 aaPredicted RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 DEFB103AP81534 67 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 CDKL1Q00532 357 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 GRB7Q14451 532 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 RPS6KA2Q15349 733 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 ZNF423Q2M1K9 1284 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 VPS26BQ4G0F5 336 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 POTEHQ6S545 545 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 RFLNAQ6ZTI6 216 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 DPF3Q92784 378 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 VPS33AQ96AX1 596 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 TUBGCP3Q96CW5 907 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 TMEM161AQ9NX61 479 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 PSMD13Q9UNM6 376 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 ASB3Q9Y575 518 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 SAC3D1A6NKF1 404 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 TIPRLO75663 272 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 CRTAMO95727 393 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 TYMPP19971 482 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 CA5AP35218 305 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 AGAP9Q5VTM2 703 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 UGT3A1Q6NUS8 523 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 PRICKLE1Q96MT3 831 aaPredicted RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 NR1H4Q96RI1 486 aaPredicted RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 MRPL57Q9BQC6 102 aaKnown RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 NOL11Q9H8H0 719 aaKnown RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 SCUBE2Q9NQ36 999 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 TREX1Q9NSU2 369 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 CD84Q9UIB8 345 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 ANKRD6Q9Y2G4 727 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 UNCXA6NJT0 531 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 FFAR3O14843 346 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 GPR42O15529 346 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 IPO13O94829 963 aaKnown RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 LTA4HP09960 611 aaKnown RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 STK19P49842 368 aaPredicted RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 SLC7A2P52569 658 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 NOGQ13253 232 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 CBX2Q14781 532 aaPredicted RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 TRIM60Q495X7 471 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 ARTNQ5T4W7 220 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 CPNE9Q8IYJ1 553 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 HS6ST3Q8IZP7 471 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 C2CD4AQ8NCU7 369 aaPredicted RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 GRIN3AQ8TCU5 1115 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 TSGA13Q96PP4 275 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 VN1R3Q9BXE9 311 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 UBA2Q9UBT2 640 aaPredicted RBP13.5□□□□□ -0.25
TTC39B-201ENST00000297615 F5P12259 2224 aa13.5□□□□□ -0.25
TTC39B-201ENST00000297615 ARHGAP10A1A4S6 786 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 MRASO14807 208 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 AKAP10O43572 662 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 BAIAP3O94812 1187 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 EOMESO95936 686 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 ATXN1LP0C7T5 689 aaKnown RBP13.49□□□□□ -0.25
TTC39B-201ENST00000297615 CHN2P52757 468 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 AIF1P55008 147 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 SH3BP2P78314 561 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms