RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 OPRD1P41143 372 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 HNRNPH2P55795 449 aaKnown RBP22.78■■□□□ 1.24
PTX3-201ENST00000295927 BST1Q10588 318 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 ATG16L1Q676U5 607 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 C10orf107Q8IVU9 208 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 SPNS2Q8IVW8 549 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 SPATA6LQ8N4H0 392 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 GPR78Q96P69 363 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 AARSD1Q9BTE6 412 aaKnown RBP22.78■■□□□ 1.24
PTX3-201ENST00000295927 IL36AQ9UHA7 158 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 MTCH2Q9Y6C9 303 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 SLC30A1Q9Y6M5 507 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 SZT2Q5T011 3432 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 CTSLP07711 333 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 MTHFRP42898 656 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 GLRBP48167 497 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 TTPAP49638 278 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 POLR2LP62875 67 aaKnown RBP22.78■■□□□ 1.24
PTX3-201ENST00000295927 CACNG1Q06432 222 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 EIF4HQ15056 248 aaKnown RBP22.78■■□□□ 1.24
PTX3-201ENST00000295927 BRAT1Q6PJG6 821 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 TBC1D1Q86TI0 1168 aaPredicted RBP22.78■■□□□ 1.24
PTX3-201ENST00000295927 SFTPA1Q8IWL2 248 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 TERB1Q8NA31 727 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 GPAMQ9HCL2 828 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 G3V2L1 256 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 GAPDHSO14556 408 aaPredicted RBP22.77■■□□□ 1.24
PTX3-201ENST00000295927 APOA4P06727 396 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 FGF3P11487 239 aaPredicted RBP22.77■■□□□ 1.24
PTX3-201ENST00000295927 BPIP17213 487 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 FDXRP22570 491 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 TIAL1Q01085 375 aaKnown RBP eCLIP22.77■■□□□ 1.24
PTX3-201ENST00000295927 LRRC73Q5JTD7 316 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 AARS2Q5JTZ9 985 aaKnown RBP22.77■■□□□ 1.24
PTX3-201ENST00000295927 LRRC66Q68CR7 880 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 FAM151BQ6UXP7 276 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 ZCCHC23Q6ZST2 131 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 PIM3Q86V86 326 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 TMEM151AQ8N4L1 468 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 ANKS4BQ8N8V4 417 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 SCYL1Q96KG9 808 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 MSLNLQ96KJ4 702 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 RPP25Q9BUL9 199 aaKnown RBP22.77■■□□□ 1.24
PTX3-201ENST00000295927 CPSF2Q9P2I0 782 aaKnown RBP22.77■■□□□ 1.24
PTX3-201ENST00000295927 VPS9D1Q9Y2B5 631 aa22.77■■□□□ 1.24
PTX3-201ENST00000295927 PFDN6O15212 129 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 GPR39O43194 453 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 WISP3O95389 354 aaPredicted RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 LHCGRP22888 699 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 GDI1P31150 447 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 FMO4P31512 558 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 ITIH4Q14624 930 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 TSNAXIP1Q2TAA8 658 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 FNDC3BQ53EP0 1204 aaKnown RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 RNF187Q5TA31 235 aaPredicted RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 LRRC8EQ6NSJ5 796 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 TAS2R42Q7RTR8 314 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 FSTL5Q8N475 847 aaPredicted RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 THOC1Q96FV9 657 aaKnown RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 OSBPL1AQ9BXW6 950 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 UNKQ9C0B0 810 aaKnown RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 IL26Q9NPH9 171 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 IGSF5Q9NSI5 407 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 TCF20Q9UGU0 1960 aaKnown RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 TK2O00142 265 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 SRP72O76094 671 aaKnown RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 PRAMEF1O95521 474 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 IL1BP01584 269 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 SBK3P0C264 359 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 CSHL1Q14406 222 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 C6orf89Q6UWU4 347 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 TMEM207Q6UWW9 146 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 SPATS2Q86XZ4 545 aaKnown RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 CBARPQ8N350 705 aaPredicted RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 KDM1BQ8NB78 822 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 PPP1R14CQ8TAE6 165 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 HEXDCQ8WVB3 486 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 LRIG1Q96JA1 1093 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 B4GALT6Q9UBX8 382 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 APPL1Q9UKG1 709 aa22.76■■□□□ 1.23
PTX3-201ENST00000295927 MTF2Q9Y483 593 aaPredicted RBP22.76■■□□□ 1.23
PTX3-201ENST00000295927 TSPAN11A1L157 253 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 TBC1D3BA6NDS4 549 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 ECI2O75521 394 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 CCDC166P0CW27 439 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 PTSQ03393 145 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 OVGP1Q12889 678 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 STX3Q13277 289 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 GRIN2CQ14957 1233 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 CCDC91Q7Z6B0 441 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 RDH11Q8TC12 318 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 ANKRD49Q8WVL7 239 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 CHFRQ96EP1 664 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 UBXN10Q96LJ8 280 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 CCDC68Q9H2F9 335 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 TTYH1Q9H313 450 aaPredicted RBP22.75■■□□□ 1.23
PTX3-201ENST00000295927 MID2Q9UJV3 735 aa22.75■■□□□ 1.23
PTX3-201ENST00000295927 OR1I1O60431 355 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 SNNO75324 88 aaPredicted RBP22.74■■□□□ 1.23
PTX3-201ENST00000295927 CHRM1P11229 460 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms