RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 CERCAMQ5T4B2 595 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 HENMT1Q5T8I9 393 aaKnown RBP13.2□□□□□ -0.3
CCDC42-201ENST00000293845 SLC23A3Q6PIS1 610 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 GPR26Q8NDV2 337 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 PTCD2Q8WV60 388 aaKnown RBP13.2□□□□□ -0.3
CCDC42-201ENST00000293845 SEC14L1Q92503 715 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 PEX13Q92968 403 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 AP2M1Q96CW1 435 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 TRIM31Q9BZY9 425 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 FAM83DQ9H4H8 585 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 AASDHPPTQ9NRN7 309 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 BFARQ9NZS9 450 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 CA5BQ9Y2D0 317 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 SNX24Q9Y343 169 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 PKP3Q9Y446 797 aa13.2□□□□□ -0.3
CCDC42-201ENST00000293845 RIF1Q5UIP0 2472 aaKnown RBP13.19□□□□□ -0.3
CCDC42-201ENST00000293845 EP300Q09472 2414 aaPredicted RBP13.19□□□□□ -0.3
CCDC42-201ENST00000293845 CABIN1Q9Y6J0 2220 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 POM121BA6NF01 834 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 BHMG1C9JSJ3 638 aaPredicted RBP13.19□□□□□ -0.3
CCDC42-201ENST00000293845 H0Y8X5 98 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 H7C0S8 307 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 STX7O15400 261 aaKnown RBP13.19□□□□□ -0.3
CCDC42-201ENST00000293845 SOD1P00441 154 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 WNT1P04628 370 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 PCCBP05166 539 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 TRIM23P36406 574 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 SPAM1P38567 509 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 RABIFP47224 123 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 CLDN2P57739 230 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 SESN2P58004 480 aaPredicted RBP13.19□□□□□ -0.3
CCDC42-201ENST00000293845 YPEL5P62699 121 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 TEAD4Q15561 434 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 PCID2Q5JVF3 399 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 PDPK2PQ6A1A2 396 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 PNCKQ6P2M8 343 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 NLRP9Q7RTR0 991 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 PELI3Q8N2H9 469 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 TRAM1L1Q8N609 369 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 PLA2G15Q8NCC3 412 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 STYXQ8WUJ0 223 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 SCAMP4Q969E2 229 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 PHOX2BQ99453 314 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 DPH5Q9H2P9 285 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 MRM3Q9HC36 420 aaKnown RBP13.19□□□□□ -0.3
CCDC42-201ENST00000293845 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 BPIFA1Q9NP55 256 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 GRHL1Q9NZI5 618 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 CD84Q9UIB8 345 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 TCAF1Q9Y4C2 921 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 KCTD3Q9Y597 815 aa13.19□□□□□ -0.3
CCDC42-201ENST00000293845 TDRD6O60522 2096 aaKnown RBP13.18□□□□□ -0.3
CCDC42-201ENST00000293845 GOLGA8CPA6NN73 597 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 GOLGA8MH3BSY2 632 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 K7ESM1 405 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 BUD23O43709 281 aaKnown RBP13.18□□□□□ -0.3
CCDC42-201ENST00000293845 MAGEC1O60732 1142 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 HOXC4P09017 264 aaPredicted RBP13.18□□□□□ -0.3
CCDC42-201ENST00000293845 MGAT1P26572 445 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 HADHAP40939 763 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 ACVR1Q04771 509 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 CALCOCO2Q13137 446 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 CBLBQ13191 982 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 SEPT6Q14141 434 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 INPP5AQ14642 412 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 PTPRCAPQ14761 206 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 TSTD2Q5T7W7 516 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 RAET1GQ6H3X3 334 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 ADAMTSL4Q6UY14 1074 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 DCP2Q8IU60 420 aaKnown RBP13.18□□□□□ -0.3
CCDC42-201ENST00000293845 PPHLN1Q8NEY8 458 aaKnown RBP13.18□□□□□ -0.3
CCDC42-201ENST00000293845 OR4K2Q8NGD2 314 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 OR13C4Q8NGS5 318 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 SKA1Q96BD8 255 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 KLHDC7BQ96G42 594 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 DNAJC1Q96KC8 554 aaKnown RBP13.18□□□□□ -0.3
CCDC42-201ENST00000293845 ZSCAN5AQ9BUG6 496 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 RIOK2Q9BVS4 552 aaKnown RBP13.18□□□□□ -0.3
CCDC42-201ENST00000293845 KIFC1Q9BW19 673 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 TEX101Q9BY14 249 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 IL26Q9NPH9 171 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 NLE1Q9NVX2 485 aaPredicted RBP13.18□□□□□ -0.3
CCDC42-201ENST00000293845 SYBUQ9NX95 663 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 NCDNQ9UBB6 729 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 ANAPC5Q9UJX4 755 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 SLC6A14Q9UN76 642 aa13.18□□□□□ -0.3
CCDC42-201ENST00000293845 GLYATL1P3A0A0U1RQE8 302 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 SDR42E2A6NKP2 422 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 PATE3B3GLJ2 98 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 TLR4O00206 839 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 GAPDHSO14556 408 aaPredicted RBP13.17□□□□□ -0.3
CCDC42-201ENST00000293845 AVILO75366 819 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 ZNF806P0C7X5 589 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 THEGLP0DJG4 465 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 GPR1P46091 355 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 CSNK1EP49674 416 aaKnown RBP13.17□□□□□ -0.3
CCDC42-201ENST00000293845 NXPH1P58417 271 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 KIAA1024LP59773 190 aa13.17□□□□□ -0.3
CCDC42-201ENST00000293845 XIAPP98170 497 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms