RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZNF354BQ96LW1 612 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 FCF1Q9Y324 198 aaKnown RBP17.26■□□□□ 0.35
SHANK1-201ENST00000293441 A0A0G2JLL6 359 aaPredicted RBP17.26■□□□□ 0.35
SHANK1-201ENST00000293441 IQCF5A8MTL0 148 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 SYN3O14994 580 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 IL6P05231 212 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 CYP4F3Q08477 520 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 DUPD1Q68J44 220 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 PRRT2Q7Z6L0 340 aaPredicted RBP17.26■□□□□ 0.35
SHANK1-201ENST00000293441 AADATQ8N5Z0 425 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 ENKURQ8TC29 256 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 SNX27Q96L92 541 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 GTF2IRD1Q9UHL9 959 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 COLEC10Q9Y6Z7 277 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.26■□□□□ 0.35
SHANK1-201ENST00000293441 STX11O75558 287 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 SASH3O75995 380 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 PSMG1O95456 288 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 CYP3A5P20815 502 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 RAPSNQ13702 412 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 NOMO1Q15155 1222 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 KLHL12Q53G59 568 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 ZCCHC7Q8N3Z6 543 aaKnown RBP17.26■□□□□ 0.35
SHANK1-201ENST00000293441 HMCESQ96FZ2 354 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 FSCN2O14926 492 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 SERPINB7O75635 380 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 PRNPP04156 253 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 MYBL2P10244 700 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 PTPN9P43378 593 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 RACGAP1Q9H0H5 632 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 C3orf14Q9HBI5 128 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 KLF15Q9UIH9 416 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 RHOQP17081 205 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 SMIM11AP58511 58 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 TCEAL5Q5H9L2 206 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 C9orf64Q5T6V5 341 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 PMF1Q6P1K2 205 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 RPTNQ6XPR3 784 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 KIAA0408Q6ZU52 694 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 ALYREFQ86V81 257 aaKnown RBP17.26■□□□□ 0.35
SHANK1-201ENST00000293441 C4orf32Q8N8J7 132 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 UBASH3BQ8TF42 649 aa17.26■□□□□ 0.35
SHANK1-201ENST00000293441 H3BNH8 94 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 PDE9AO76083 593 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 IDSP22304 550 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 DQX1Q8TE96 717 aaKnown RBP17.25■□□□□ 0.35
SHANK1-201ENST00000293441 IRGQQ8WZA9 623 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 PCDHB1Q9Y5F3 818 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 MYO5BQ9ULV0 1848 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 A0A1W2PPM1 405 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 TEX28O15482 410 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 USP46P62068 366 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 LDB1Q86U70 411 aaPredicted RBP17.25■□□□□ 0.35
SHANK1-201ENST00000293441 SCLYQ96I15 445 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 ACBD6Q9BR61 282 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 OR2AG2A6NM03 316 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 MMP8P22894 467 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 PRKG2Q13237 762 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 RIPOR3Q96MK2 946 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 CDH19Q9H159 772 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 PNPOQ9NVS9 261 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 CPQQ9Y646 472 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 SLC38A8A6NNN8 435 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 HDAC3O15379 428 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 BIRC5O15392 142 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 TFPIP10646 304 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 IDO1P14902 403 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 CDH4P55283 916 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 CAP1Q01518 475 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 USP4Q13107 963 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 CCNYL2Q5T2Q4 361 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 CCDC185Q8N715 623 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 OR7D4Q8NG98 312 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 SLC47A1Q96FL8 570 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 TRAPPC9Q96Q05 1148 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 PER2O15055 1255 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 SNHG28P0DPA3 235 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 CYP4F8P98187 520 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 ULK2Q8IYT8 1036 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 TEX47Q8TBZ9 253 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 AP2M1Q96CW1 435 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 PTCD3Q96EY7 689 aaKnown RBP17.25■□□□□ 0.35
SHANK1-201ENST00000293441 FEM1CQ96JP0 617 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 ZFRQ96KR1 1074 aaKnown RBP17.25■□□□□ 0.35
SHANK1-201ENST00000293441 PAIP1Q9H074 479 aaKnown RBP17.25■□□□□ 0.35
SHANK1-201ENST00000293441 ACSS3Q9H6R3 686 aa17.25■□□□□ 0.35
SHANK1-201ENST00000293441 TPP2P29144 1249 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 MAT2AP31153 395 aaKnown RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 CACNG1Q06432 222 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 RNASEH2BQ5TBB1 312 aaKnown RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 RCN3Q96D15 328 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 GBA3Q9H227 469 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 DDX18Q9NVP1 670 aaKnown RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 C5orf60A6NFR6 353 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 KLHL18O94889 574 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 DLG2Q15700 870 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 CAMK1DQ8IU85 385 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 EIF1ADQ8N9N8 165 aaKnown RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms