RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 EBF3Q9H4W6 596 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 INTS6Q9UL03 887 aaKnown RBP20.94■□□□□ 0.94
YBX3-202ENST00000279550 HOXC11O43248 304 aaPredicted RBP20.93■□□□□ 0.94
YBX3-202ENST00000279550 NFATC1O95644 943 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 ADH5P11766 374 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 ALOX15P16050 662 aaPredicted RBP20.93■□□□□ 0.94
YBX3-202ENST00000279550 PLK1P53350 603 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 LIPMQ5VYY2 423 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 FAM91A1Q658Y4 838 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 ASTLQ6HA08 431 aaPredicted RBP20.93■□□□□ 0.94
YBX3-202ENST00000279550 PARM1Q6UWI2 310 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 WDR75Q8IWA0 830 aaKnown RBP20.93■□□□□ 0.94
YBX3-202ENST00000279550 FGF14Q92915 247 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 ACDQ96AP0 544 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 ELSPBP1Q96BH3 223 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 TSPAN17Q96FV3 270 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 TM6SF2Q9BZW4 377 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 KLC4Q9NSK0 619 aa20.93■□□□□ 0.94
YBX3-202ENST00000279550 POLR3BQ9NW08 1133 aaPredicted RBP20.93■□□□□ 0.94
YBX3-202ENST00000279550 H2AFYO75367 372 aaKnown RBP20.92■□□□□ 0.94
YBX3-202ENST00000279550 CHRNGP07510 517 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 OGNP20774 298 aaKnown RBP20.92■□□□□ 0.94
YBX3-202ENST00000279550 GRIA4P48058 902 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 TECRLQ5HYJ1 363 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 MRNIPQ6NTE8 343 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 TREML1Q86YW5 311 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 NAT16Q8N8M0 369 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 TXNDC5Q8NBS9 432 aaKnown RBP20.92■□□□□ 0.94
YBX3-202ENST00000279550 TTC8Q8TAM2 541 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 MYLIPQ8WY64 445 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 KXD1Q9BQD3 176 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 SLC2A11Q9BYW1 496 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 PLA2G2FQ9BZM2 168 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 MRPL46Q9H2W6 279 aaKnown RBP20.92■□□□□ 0.94
YBX3-202ENST00000279550 MYOFQ9NZM1 2061 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 ANKRD66B4E2M5 251 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 FZD6O60353 706 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 CCDC166P0CW27 439 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 FDXRP22570 491 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 MPSTP25325 297 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 HNRNPH1P31943 449 aaKnown RBP20.92■□□□□ 0.94
YBX3-202ENST00000279550 IDH3AP50213 366 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 KRT72Q14CN4 511 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 PDGFRLQ15198 375 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 TYSND1Q2T9J0 566 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 PITRM1Q5JRX3 1037 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 VWA5B1Q5TIE3 1220 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 OR6K2Q8NGY2 324 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 SREK1Q8WXA9 508 aaKnown RBP20.92■□□□□ 0.94
YBX3-202ENST00000279550 MRPL57Q9BQC6 102 aaKnown RBP20.92■□□□□ 0.94
YBX3-202ENST00000279550 SIKE1Q9BRV8 207 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 ADGRE3Q9BY15 652 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 CDH19Q9H159 772 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 GPAMQ9HCL2 828 aa20.92■□□□□ 0.94
YBX3-202ENST00000279550 PRUNE2Q8WUY3 3088 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 NEMP2A6NFY4 417 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 OTOL1A6NHN0 477 aaPredicted RBP20.91■□□□□ 0.94
YBX3-202ENST00000279550 LTA4HP09960 611 aaKnown RBP20.91■□□□□ 0.94
YBX3-202ENST00000279550 PABPC1P11940 636 aaKnown RBP20.91■□□□□ 0.94
YBX3-202ENST00000279550 PSMC3P17980 439 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 CDKN1CP49918 316 aaPredicted RBP20.91■□□□□ 0.94
YBX3-202ENST00000279550 STC1P52823 247 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 NAGLUP54802 743 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 GRM2Q14416 872 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 CCDC85BQ15834 202 aaPredicted RBP20.91■□□□□ 0.94
YBX3-202ENST00000279550 FUT11Q495W5 492 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 FAM45BPQ6NSW5 357 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 RETSATQ6NUM9 610 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 AFTPHQ6ULP2 937 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 Q7L0L9 218 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 LSMEM2Q8N112 164 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 FAM45AQ8TCE6 357 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 INPP5DQ92835 1189 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 NSL1Q96IY1 281 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 UBXN10Q96LJ8 280 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 RILPQ96NA2 401 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 CDX2Q99626 313 aaPredicted RBP20.91■□□□□ 0.94
YBX3-202ENST00000279550 DRC3Q9H069 523 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 DNAJC28Q9NX36 388 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 EVLQ9UI08 416 aaPredicted RBP20.91■□□□□ 0.94
YBX3-202ENST00000279550 FKBPLQ9UIM3 349 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 LNPEPQ9UIQ6 1025 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 FBXO10Q9UK96 956 aa20.91■□□□□ 0.94
YBX3-202ENST00000279550 KIF26AQ9ULI4 1882 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 C2orf81A6NN90 581 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 A8MUI8 341 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 CAPN14A8MX76 684 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 MGRN1O60291 552 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 ECI2O75521 394 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 LPOP22079 712 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 KCNA5P22460 613 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 ALDH18A1P54886 795 aaKnown RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 PFKPQ01813 784 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 RCN2Q14257 317 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 CAMK1DQ8IU85 385 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 YAF2Q8IY57 180 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 UBE2ZQ9H832 354 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 BPIFA1Q9NP55 256 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 HPS4Q9NQG7 708 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 EPS15L1Q9UBC2 864 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms