RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 TTLL2Q9BWV7 592 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 C1QTNF3Q9BXJ4 246 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 DERL2Q9GZP9 239 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 SYTL2Q9HCH5 934 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 TXNDC9O14530 226 aa25■■□□□ 1.59
ROM1-201ENST00000278833 KERAO60938 352 aa25■■□□□ 1.59
ROM1-201ENST00000278833 VPS4BO75351 444 aa25■■□□□ 1.59
ROM1-201ENST00000278833 RNASEH2AO75792 299 aaKnown RBP25■■□□□ 1.59
ROM1-201ENST00000278833 CDK14O94921 469 aa25■■□□□ 1.59
ROM1-201ENST00000278833 TBX18O95935 607 aa25■■□□□ 1.59
ROM1-201ENST00000278833 SLC7A1P30825 629 aa25■■□□□ 1.59
ROM1-201ENST00000278833 SEMA3AQ14563 771 aa25■■□□□ 1.59
ROM1-201ENST00000278833 ZNF354CQ86Y25 554 aa25■■□□□ 1.59
ROM1-201ENST00000278833 PHYKPLQ8IUZ5 450 aa25■■□□□ 1.59
ROM1-201ENST00000278833 PTGR2Q8N8N7 351 aaPredicted RBP25■■□□□ 1.59
ROM1-201ENST00000278833 PCYOX1LQ8NBM8 494 aa25■■□□□ 1.59
ROM1-201ENST00000278833 ATAD1Q8NBU5 361 aa25■■□□□ 1.59
ROM1-201ENST00000278833 TSPEARQ8WU66 669 aa25■■□□□ 1.59
ROM1-201ENST00000278833 KIAA1191Q96A73 305 aa25■■□□□ 1.59
ROM1-201ENST00000278833 GPATCH1Q9BRR8 931 aaKnown RBP25■■□□□ 1.59
ROM1-201ENST00000278833 CCDC167Q9P0B6 97 aa25■■□□□ 1.59
ROM1-201ENST00000278833 ABCD2Q9UBJ2 740 aa25■■□□□ 1.59
ROM1-201ENST00000278833 PRG3Q9Y2Y8 225 aaPredicted RBP25■■□□□ 1.59
ROM1-201ENST00000278833 FIS1Q9Y3D6 152 aa25■■□□□ 1.59
ROM1-201ENST00000278833 ARIH1Q9Y4X5 557 aaPredicted RBP25■■□□□ 1.59
ROM1-201ENST00000278833 COMMD3-BMI1R4GMX3 469 aa25■■□□□ 1.59
ROM1-201ENST00000278833 PMLP29590 882 aa25■■□□□ 1.59
ROM1-201ENST00000278833 ATN1P54259 1190 aaPredicted RBP25■■□□□ 1.59
ROM1-201ENST00000278833 ATP6V0D1P61421 351 aa25■■□□□ 1.59
ROM1-201ENST00000278833 PAOXQ6QHF9 649 aa25■■□□□ 1.59
ROM1-201ENST00000278833 PCDH20Q8N6Y1 951 aaKnown RBP25■■□□□ 1.59
ROM1-201ENST00000278833 RNF148Q8N7C7 305 aa25■■□□□ 1.59
ROM1-201ENST00000278833 ZFRQ96KR1 1074 aaKnown RBP25■■□□□ 1.59
ROM1-201ENST00000278833 SEPT3Q9UH03 358 aa25■■□□□ 1.59
ROM1-201ENST00000278833 NDUFAF1Q9Y375 327 aa25■■□□□ 1.59
ROM1-201ENST00000278833 AP4S1Q9Y587 144 aa25■■□□□ 1.59
ROM1-201ENST00000278833 ARL5AQ9Y689 179 aa25■■□□□ 1.59
ROM1-201ENST00000278833 PRORSD1PA6NEY8 169 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 F5H5T6 163 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 CCL22O00626 93 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 TNFAIP8O95379 198 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 ALDOCP09972 364 aaKnown RBP24.99■■□□□ 1.59
ROM1-201ENST00000278833 ZNF26P17031 533 aaPredicted RBP24.99■■□□□ 1.59
ROM1-201ENST00000278833 C6orf10Q5SRN2 563 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 AFTPHQ6ULP2 937 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 RPS27LQ71UM5 84 aaKnown RBP24.99■■□□□ 1.59
ROM1-201ENST00000278833 MIB1Q86YT6 1006 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 FUNDC1Q8IVP5 155 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 BLOC1S5Q8TDH9 187 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 PSKH2Q96QS6 385 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 MRPS26Q9BYN8 205 aaKnown RBP24.99■■□□□ 1.59
ROM1-201ENST00000278833 TMCO1Q9UM00 188 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 CRYL1Q9Y2S2 319 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 DNAJC15Q9Y5T4 150 aa24.99■■□□□ 1.59
ROM1-201ENST00000278833 LCHNA4D1U4 455 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 AZIN1O14977 448 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 VNN2O95498 520 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 CALRP27797 417 aaKnown RBP24.98■■□□□ 1.59
ROM1-201ENST00000278833 ETFBP38117 255 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 SH3BP2P78314 561 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 OR4D1Q15615 310 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 THEMIS2Q5TEJ8 643 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 CLEC6AQ6EIG7 209 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 OGFOD2Q6N063 350 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 SH3RF2Q8TEC5 729 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 LPGAT1Q92604 370 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 ZUFSPQ96AP4 578 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 CDKN2AIPNLQ96HQ2 116 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 ZNF597Q96LX8 424 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 SH3GL3Q99963 347 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 HOPXQ9BPY8 73 aaPredicted RBP24.98■■□□□ 1.59
ROM1-201ENST00000278833 UBAP1Q9NZ09 502 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 KLK8O60259 260 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 CES1P23141 567 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 MSX2P35548 267 aaPredicted RBP24.98■■□□□ 1.59
ROM1-201ENST00000278833 FOXM1Q08050 763 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 GRIK2Q13002 908 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 IL23RQ5VWK5 629 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 SLC39A5Q6ZMH5 540 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 CIR1Q86X95 450 aaPredicted RBP24.98■■□□□ 1.59
ROM1-201ENST00000278833 PBXIP1Q96AQ6 731 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 TRIM4Q9C037 500 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 AKTIPQ9H8T0 292 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 VPS9D1Q9Y2B5 631 aa24.98■■□□□ 1.59
ROM1-201ENST00000278833 TTC24A2A3L6 582 aaPredicted RBP24.97■■□□□ 1.59
ROM1-201ENST00000278833 STX16O14662 325 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 CR2P20023 1033 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 GSTT1P30711 240 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 GNA12Q03113 381 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 MGAT5BQ3V5L5 792 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 FAM171A1Q5VUB5 890 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 OR52K2Q8NGK3 314 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 OR13C4Q8NGS5 318 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 TWIST2Q8WVJ9 160 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.97■■□□□ 1.59
ROM1-201ENST00000278833 MYEOVQ96EZ4 313 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 C3orf30Q96M34 536 aa24.97■■□□□ 1.59
ROM1-201ENST00000278833 PRICKLE1Q96MT3 831 aaPredicted RBP24.97■■□□□ 1.59
ROM1-201ENST00000278833 NUSAP1Q9BXS6 441 aaKnown RBP24.97■■□□□ 1.59
ROM1-201ENST00000278833 TMEM45AQ9NWC5 275 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms