RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CCDC166P0CW27 439 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 ARRB2P32121 409 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 PRKAA2P54646 552 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 CSHL1Q14406 222 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 GAB4Q2WGN9 574 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 GALNTL6Q49A17 601 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 AARS2Q5JTZ9 985 aaKnown RBP22■■□□□ 1.11
CCDC7-201ENST00000277657 ANKRD54Q6NXT1 300 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 PIM3Q86V86 326 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 GBP7Q8N8V2 638 aaPredicted RBP22■■□□□ 1.11
CCDC7-201ENST00000277657 SORCS1Q8WY21 1168 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 MCCC1Q96RQ3 725 aaPredicted RBP22■■□□□ 1.11
CCDC7-201ENST00000277657 A0A1W2PQ67 120 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 GAPDHSO14556 408 aaPredicted RBP22■■□□□ 1.11
CCDC7-201ENST00000277657 PFDN6O15212 129 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 LINC01565O15544 149 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 TULP3O75386 442 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 LYPLA1O75608 230 aaPredicted RBP22■■□□□ 1.11
CCDC7-201ENST00000277657 CLDN7O95471 211 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 ASLP04424 464 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 SRPRAP08240 638 aaKnown RBP22■■□□□ 1.11
CCDC7-201ENST00000277657 ABCE1P61221 599 aaKnown RBP22■■□□□ 1.11
CCDC7-201ENST00000277657 CACNG1Q06432 222 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 PTPRNQ16849 979 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 ZRANB3Q5FWF4 1079 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 NAPRTQ6XQN6 538 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 ATG14Q6ZNE5 492 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 ZFYVE19Q96K21 471 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 BIRC8Q96P09 236 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 SORT1Q99523 831 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 EBF3Q9H4W6 596 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 NSUN3Q9H649 340 aaKnown RBP22■■□□□ 1.11
CCDC7-201ENST00000277657 MED16Q9Y2X0 877 aa22■■□□□ 1.11
CCDC7-201ENST00000277657 A0A0G2JND7 137 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 UBA6A0AVT1 1052 aaPredicted RBP21.99■■□□□ 1.11
CCDC7-201ENST00000277657 NPIPB15A6NHN6 443 aaPredicted RBP21.99■■□□□ 1.11
CCDC7-201ENST00000277657 CCDC85CA6NKD9 419 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 DCTN3O75935 186 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 UGT2B4P06133 528 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 ATP5BP06576 529 aaKnown RBP21.99■■□□□ 1.11
CCDC7-201ENST00000277657 NNMTP40261 264 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 ARFIP2P53365 341 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 ADARP55265 1226 aaKnown RBP21.99■■□□□ 1.11
CCDC7-201ENST00000277657 ACAP2Q15057 778 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 TECRLQ5HYJ1 363 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 LIPMQ5VYY2 423 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 TPRG1Q6ZUI0 275 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 SPNS2Q8IVW8 549 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 GRIN3AQ8TCU5 1115 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 FAM96AQ9H5X1 160 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 KCNK4Q9NYG8 393 aa21.99■■□□□ 1.11
CCDC7-201ENST00000277657 C5orf42Q9H799 3197 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 OTOL1A6NHN0 477 aaPredicted RBP21.98■■□□□ 1.11
CCDC7-201ENST00000277657 TTC34A8MYJ7 566 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 TMEM114B3SHH9 223 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 FMO4P31512 558 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 RECQLP46063 649 aaPredicted RBP21.98■■□□□ 1.11
CCDC7-201ENST00000277657 KLC3Q6P597 504 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 CRTC1Q6UUV9 634 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 GDPD4Q6W3E5 623 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 USP45Q70EL2 814 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 CBARPQ8N350 705 aaPredicted RBP21.98■■□□□ 1.11
CCDC7-201ENST00000277657 GATA5Q9BWX5 397 aaPredicted RBP21.98■■□□□ 1.11
CCDC7-201ENST00000277657 TMEM120AQ9BXJ8 343 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 UNKQ9C0B0 810 aaKnown RBP21.98■■□□□ 1.11
CCDC7-201ENST00000277657 CIPCQ9C0C6 399 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 CDH7Q9ULB5 785 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 MTF2Q9Y483 593 aaPredicted RBP21.98■■□□□ 1.11
CCDC7-201ENST00000277657 SLC30A1Q9Y6M5 507 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 MYO9BQ13459 2157 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 DLX3O60479 287 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 UBOX5O94941 541 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 RBP1P09455 135 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 CD9P21926 228 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 PDGFRLQ15198 375 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 TSPAN33Q86UF1 283 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 PIWIL2Q8TC59 973 aaKnown RBP21.98■■□□□ 1.11
CCDC7-201ENST00000277657 TIFAQ96CG3 184 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 LRRC37BQ96QE4 947 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 HEPHQ9BQS7 1158 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 IL26Q9NPH9 171 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 APPL1Q9UKG1 709 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 SLC12A4Q9UP95 1085 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 FNDC3AQ9Y2H6 1198 aaKnown RBP21.98■■□□□ 1.11
CCDC7-201ENST00000277657 WASF2Q9Y6W5 498 aa21.98■■□□□ 1.11
CCDC7-201ENST00000277657 SRP72O76094 671 aaKnown RBP21.97■■□□□ 1.11
CCDC7-201ENST00000277657 ZNF37AP17032 561 aaPredicted RBP21.97■■□□□ 1.11
CCDC7-201ENST00000277657 BPIP17213 487 aa21.97■■□□□ 1.11
CCDC7-201ENST00000277657 SP100P23497 879 aaPredicted RBP21.97■■□□□ 1.11
CCDC7-201ENST00000277657 PTGER3P43115 390 aa21.97■■□□□ 1.11
CCDC7-201ENST00000277657 HSF5Q4G112 596 aaPredicted RBP21.97■■□□□ 1.11
CCDC7-201ENST00000277657 SETMARQ53H47 684 aaPredicted RBP21.97■■□□□ 1.11
CCDC7-201ENST00000277657 TANGO2Q6ICL3 276 aa21.97■■□□□ 1.11
CCDC7-201ENST00000277657 CERS6Q6ZMG9 384 aa21.97■■□□□ 1.11
CCDC7-201ENST00000277657 PPP4R1Q8TF05 950 aa21.97■■□□□ 1.11
CCDC7-201ENST00000277657 SIKE1Q9BRV8 207 aa21.97■■□□□ 1.11
CCDC7-201ENST00000277657 CCDC68Q9H2F9 335 aa21.97■■□□□ 1.11
CCDC7-201ENST00000277657 ECT2Q9H8V3 914 aa21.97■■□□□ 1.11
CCDC7-201ENST00000277657 ACTR5Q9H9F9 607 aaPredicted RBP21.97■■□□□ 1.11
CCDC7-201ENST00000277657 THG1LQ9NWX6 298 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms