RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SEL1L3Q68CR1 1132 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 ASTLQ6HA08 431 aaPredicted RBP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 LYSMD3Q7Z3D4 306 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 SPRED2Q7Z698 418 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 TMPRSS6Q8IU80 811 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 TEX9Q8N6V9 391 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 KDM1BQ8NB78 822 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 FAM13CQ8NE31 585 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 OR6K2Q8NGY2 324 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 MAGEC3Q8TD91 643 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 STON2Q8WXE9 905 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 ISG20Q96AZ6 181 aaKnown RBP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 PTERQ96BW5 349 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 RPL10LQ96L21 214 aaKnown RBP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 BIRC8Q96P09 236 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 SHCBP1LQ9BZQ2 653 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 CCDC68Q9H2F9 335 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 TNKS2Q9H2K2 1166 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 LINC00597Q9H2U6 94 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 TFB2MQ9H5Q4 396 aaKnown RBP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 CYP4F12Q9HCS2 524 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 TAS2R13Q9NYV9 303 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 MED16Q9Y2X0 877 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 A0A0J9YYE9 177 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 C5orf67F2Z3F1 127 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 SOCS5O75159 536 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 IGSF6O95976 241 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 TRBC1P01850 177 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 RB1P06400 928 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 PKMP14618 531 aaKnown RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF37AP17032 561 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 NCF2P19878 526 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 CD9P21926 228 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 CPA2P48052 419 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 NTHL1P78549 312 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 KDSRQ06136 332 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 SLC5A9Q2M3M2 681 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 MYLK3Q32MK0 819 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 PRSS36Q5K4E3 855 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 PAQR3Q6TCH7 311 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 TAS2R42Q7RTR8 314 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 C7orf61Q8IZ16 206 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 LEMD2Q8NC56 503 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 OR2AP1Q8NGE2 309 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 IRF7Q92985 503 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 PHF21BQ96EK2 531 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 OR52B2Q96RD2 323 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 CCDC28BQ9BUN5 200 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 WDR55Q9H6Y2 383 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 ATP13A3Q9H7F0 1226 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 OR1I1O60431 355 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 XYLBO75191 536 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 SMIM24O75264 130 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 ARHGEF15O94989 841 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 TPBGLP0DKB5 382 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 HNRNPLP14866 589 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 SYN1P17600 705 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 SP100P23497 879 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 HNF1BP35680 557 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 PTGER3P43115 390 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 STK19P49842 368 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 SNRPD1P62314 119 aaKnown RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 CACNG1Q06432 222 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 GALNT1Q10472 559 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 OR4D1Q15615 310 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 CDKN3Q16667 212 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 LSM12Q3MHD2 195 aaKnown RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 FUT11Q495W5 492 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 AARS2Q5JTZ9 985 aaKnown RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 WASHC2DQ5SRD0 308 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 RYBPQ8N488 228 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 RHEBL1Q8TAI7 183 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 VOPP1Q96AW1 172 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 FAM136AQ96C01 138 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 L3HYPDHQ96EM0 354 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 ZSWIM3Q96MP5 696 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 GPR21Q99679 349 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 C19orf43Q9BQ61 176 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 DERL2Q9GZP9 239 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 C1orf21Q9H246 121 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 ZFYVE1Q9HBF4 777 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 EML4Q9HC35 981 aaKnown RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 TCF7L2Q9NQB0 619 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 SPHK2Q9NRA0 654 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 TBC1D14Q9P2M4 693 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 GALPQ9UBC7 116 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 FAM50BQ9Y247 325 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 HS3ST2Q9Y278 367 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 FNDC3AQ9Y2H6 1198 aaKnown RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 OAS3Q9Y6K5 1087 aaKnown RBP9.55□□□□□ -0.88
TRIM55-201ENST00000276573 SLC30A1Q9Y6M5 507 aa9.55□□□□□ -0.88
TRIM55-201ENST00000276573 GOLGA8QA0A0J9YX86 632 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 GOLGA8OA6NCC3 632 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 GOLGA8NF8WBI6 632 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 H3BMM5 538 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CHUKO15111 745 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 VPS26AO75436 327 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 WFS1O76024 890 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CLDN7O95471 211 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms