RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 NCKIPSDQ9NZQ3 722 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 GULP1Q9UBP9 304 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 PADI4Q9UM07 663 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 ENTPD2Q9Y5L3 495 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 A0A0U1RQJ8 604 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 GOLGA6CA6NDK9 693 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 GOLGA6BA6NDN3 693 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 ANKRD66B4E2M5 251 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 GOLGA6DP0CG33 693 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 KELP23276 732 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 PTPN3P26045 913 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 TEAD1P28347 426 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 POLD2P49005 469 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 NR2C2P49116 596 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 RPL26P61254 145 aaKnown RBP14.38□□□□□ -0.11
HMGN3-201ENST00000275036 TFDP2Q14188 446 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 GALNT3Q14435 633 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 TBC1D25Q3MII6 688 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 TEX44Q53QW1 395 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 GKN2Q86XP6 184 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 CCDC74AQ96AQ1 378 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 AP2M1Q96CW1 435 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 EID2BQ96D98 161 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 ATXN7L3BQ96GX2 97 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 WDR24Q96S15 920 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 ANP32EQ9BTT0 268 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 SLC25A51Q9H1U9 297 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 LUC7LQ9NQ29 371 aaKnown RBP14.38□□□□□ -0.11
HMGN3-201ENST00000275036 PHPT1Q9NRX4 125 aaPredicted RBP14.38□□□□□ -0.11
HMGN3-201ENST00000275036 EVA1BQ9NVM1 165 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 GOLGA6AQ9NYA3 693 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 MOSPD1Q9UJG1 213 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 RPL26L1Q9UNX3 145 aaKnown RBP14.38□□□□□ -0.11
HMGN3-201ENST00000275036 GPR34Q9UPC5 381 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 DOLKQ9UPQ8 538 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 ST14Q9Y5Y6 855 aa14.38□□□□□ -0.11
HMGN3-201ENST00000275036 A0A1W2PQM1 296 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 NTN3O00634 580 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 PJA2O43164 708 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 NOBOXO60393 691 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 ZRANB2O95218 330 aaKnown RBP eCLIP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 MT-CYBP00156 380 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 CA4P22748 312 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 CD68P34810 354 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 CTNNA1P35221 906 aaKnown RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 GPR1P46091 355 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 GABREP78334 506 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 WASHC5Q12768 1159 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 ZNF765Q7L2R6 523 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 KDELC2Q7Z4H8 507 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 TRIM74Q86UV6 250 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 NT5DC3Q86UY8 548 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 ZC3H18Q86VM9 953 aaKnown RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 NRROSQ86YC3 692 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 CCDC50Q8IVM0 306 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 RCOR2Q8IZ40 523 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 SDR16C5Q8N3Y7 309 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 GPR156Q8NFN8 814 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 EXD1Q8NHP7 514 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 GLMNQ92990 594 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 PRR11Q96HE9 360 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 BBC3Q96PG8 261 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 BAG1Q99933 345 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 MLPHQ9BV36 600 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 RIOK2Q9BVS4 552 aaKnown RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 HEMGNQ9BXL5 484 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 SUDS3Q9H7L9 328 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 CARS2Q9HA77 564 aaKnown RBP14.37□□□□□ -0.11
HMGN3-201ENST00000275036 GLOD4Q9HC38 313 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 ASCL3Q9NQ33 180 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 SUFUQ9UMX1 484 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 SATB2Q9UPW6 733 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 PTPRQQ9UMZ3 2332 aa14.37□□□□□ -0.11
HMGN3-201ENST00000275036 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 BTNL10A8MVZ5 291 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 PDE2AO00408 941 aaPredicted RBP14.36□□□□□ -0.11
HMGN3-201ENST00000275036 PIRTP0C851 137 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 RPIAP49247 311 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 VAV2P52735 878 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 PPP2R5EQ16537 467 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 PCSK7Q16549 785 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 C3orf38Q5JPI3 329 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 OGFOD3Q6PK18 319 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 DOK6Q6PKX4 331 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 ADAMTSL4Q6UY14 1074 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 RBM44Q6ZP01 1051 aaKnown RBP14.36□□□□□ -0.11
HMGN3-201ENST00000275036 LYSMD3Q7Z3D4 306 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 TAF8Q7Z7C8 310 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 B3GNT8Q7Z7M8 397 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 NLRP8Q86W28 1048 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 LRRC57Q8N9N7 239 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 SPC24Q8NBT2 197 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 FAM46DQ8NEK8 389 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 TFB1MQ8WVM0 346 aaKnown RBP14.36□□□□□ -0.11
HMGN3-201ENST00000275036 SCG3Q8WXD2 468 aaKnown RBP14.36□□□□□ -0.11
HMGN3-201ENST00000275036 P3H4Q92791 437 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 FGF11Q92914 225 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms