RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 RAD51BO15315 384 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 AQP1P29972 269 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 GDF5P43026 501 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 USP46P62068 366 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 MSLNQ13421 630 aaPredicted RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 LPCAT2Q7L5N7 544 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 TAGAPQ8N103 731 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 FAM47BQ8NA70 645 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 MS4A4AQ96JQ5 239 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 SLC45A3Q96JT2 553 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 TUBGCP5Q96RT8 1024 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 ALG2Q9H553 416 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 IRAK4Q9NWZ3 460 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 LAMB1P07942 1786 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 PDLIM1O00151 329 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 GJB3O75712 270 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 ZBTB11O95625 1053 aaPredicted RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 LDLRP01130 860 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 FGF1P05230 155 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 ZNF865P0CJ78 1059 aaPredicted RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 LSM3P62310 102 aaKnown RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 IRX1P78414 480 aaPredicted RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 GALNT2Q10471 571 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 DLG1Q12959 904 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 UPP1Q16831 310 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 KIAA0319Q5VV43 1072 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 TRMT11Q7Z4G4 463 aaKnown RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 FBXO22Q8NEZ5 403 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 RMND5BQ96G75 393 aaPredicted RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 FOPNLQ96NB1 174 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 FCRL5Q96RD9 977 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 MARCH4Q9P2E8 410 aaPredicted RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 COPG1Q9Y678 874 aaKnown RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 COL2A1P02458 1487 aaPredicted RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 XIRP1Q702N8 1843 aaKnown RBP14.57□□□□□ -0.08
CNOT9-201ENST00000273064 LTBP4Q8N2S1 1624 aa14.57□□□□□ -0.08
CNOT9-201ENST00000273064 C15orf38-AP3S2A0A0A6YYH1 394 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 LINC00854A0A1B0GVQ3 168 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 TCRBV5S1A1TA0A578 114 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 TRIM38O00635 465 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 DCLK1O15075 740 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 MAGEC1O60732 1142 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 SLC25A14O95258 325 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 NDST3O95803 873 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 PKMP14618 531 aaKnown RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 GLDCP23378 1020 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 CD68P34810 354 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 BLMHQ13867 455 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 DGCR6Q14129 220 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 GPRIN3Q6ZVF9 776 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ARPINQ7Z6K5 226 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 RASAL3Q86YV0 1011 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 CENPLQ8N0S6 344 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ZNF555Q8NEP9 628 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 SPPL2BQ8TCT7 592 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 IGSF8Q969P0 613 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 MYOCQ99972 504 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 SIKE1Q9BRV8 207 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 RTKNQ9BST9 563 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 C2orf49Q9BVC5 232 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 TTC3P53804 2025 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 NUP214P35658 2090 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 A8MT66 165 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 HS6ST1O60243 411 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ACRP10323 421 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 MTHFD1P11586 935 aaKnown RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ETV4P43268 484 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 CASP9P55211 416 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 HTRA3P83110 453 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 SPESP1Q6UW49 350 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 RBM44Q6ZP01 1051 aaKnown RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 UTS2BQ765I0 119 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 NSUN5Q96P11 429 aaKnown RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 POLR3HQ9Y535 204 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 RAD54BQ9Y620 910 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ACSL4O60488 711 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 MGEA5O60502 916 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 GJB5O95377 273 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 CKBP12277 381 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 HLA-DPA1P20036 260 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ALDH9A1P49189 494 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 KPNA1P52294 538 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ZNF135P52742 658 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 CHN2P52757 468 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 AIF1P55008 147 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 WLSQ5T9L3 541 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 TMEM161AQ9NX61 479 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 CFAP97Q9P2B7 532 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 GABBR2O75899 941 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 CYP4F8P98187 520 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 IKBKEQ14164 716 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 SPDYE7PQ495Y7 208 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 PAQR9Q6ZVX9 377 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 BNIPLQ7Z465 357 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ZNF467Q7Z7K2 595 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ATG16L2Q8NAA4 619 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 ITFG1Q8TB96 612 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 KCTD13Q8WZ19 329 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 PHF12Q96QT6 1004 aa14.56□□□□□ -0.08
CNOT9-201ENST00000273064 SMG9Q9H0W8 520 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms