RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 DLX3O60479 287 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 TULP3O75386 442 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 POLR2EP19388 210 aaKnown RBP12.09□□□□□ -0.47
SDE2-201ENST00000272091 LHCGRP22888 699 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 CCR10P46092 362 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 DGKGP49619 791 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 CORO7P57737 925 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 RNF187Q5TA31 235 aaPredicted RBP12.09□□□□□ -0.47
SDE2-201ENST00000272091 CRTC1Q6UUV9 634 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 ZNF557Q8N988 423 aaPredicted RBP12.09□□□□□ -0.47
SDE2-201ENST00000272091 GABPB2Q8TAK5 448 aaPredicted RBP12.09□□□□□ -0.47
SDE2-201ENST00000272091 GPR63Q9BZJ6 419 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 THAP1Q9NVV9 213 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 FNDC3AQ9Y2H6 1198 aaKnown RBP12.09□□□□□ -0.47
SDE2-201ENST00000272091 USH1CQ9Y6N9 552 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 PLXNA2O75051 1894 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 C1orf232A0A0U1RR37 186 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 PRRT4C9JH25 899 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 UBOX5O94941 541 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 CCDC166P0CW27 439 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 KCNC1P48547 511 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 MAVSQ7Z434 540 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 PHTF2Q8N3S3 785 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 RDH11Q8TC12 318 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 MCCC1Q96RQ3 725 aaPredicted RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 SLC30A3Q99726 388 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 TMEM120AQ9BXJ8 343 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 ZFYVE1Q9HBF4 777 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 GPAMQ9HCL2 828 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 CLEC1BQ9P126 229 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 CORO1CQ9ULV4 474 aaPredicted RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 SLC27A6Q9Y2P4 619 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 ANTXRLA6NF34 631 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 HGSO14964 777 aaPredicted RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 UGT2B4P06133 528 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 BPIP17213 487 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 KCNA5P22460 613 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 FMO4P31512 558 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 LRRC73Q5JTD7 316 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 TXNDC5Q8NBS9 432 aaKnown RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 ZNF398Q8TD17 642 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 FAM136AQ96C01 138 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 GATA5Q9BWX5 397 aaPredicted RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 TRIM55Q9BYV6 548 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 MARCOQ9UEW3 520 aaPredicted RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 IKZF3Q9UKT9 509 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 SLC12A4Q9UP95 1085 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 POP4O95707 220 aaKnown RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 MYL2P10916 166 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 RFLNAQ6ZTI6 216 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 CCDC121Q6ZUS5 278 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 SDCCAG8Q86SQ7 713 aaPredicted RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 PTERQ96BW5 349 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 TSPAN17Q96FV3 270 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 PRR11Q96HE9 360 aaPredicted RBP12.08□□□□□ -0.48
SDE2-201ENST00000272091 GDE1Q9NZC3 331 aa12.08□□□□□ -0.48
SDE2-201ENST00000272091 ADH1CP00326 375 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 LTA4HP09960 611 aaKnown RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 TROVE2P10155 538 aaKnown RBP eCLIP12.07□□□□□ -0.48
SDE2-201ENST00000272091 VASPP50552 380 aaPredicted RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 SLC12A2P55011 1212 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 ABCE1P61221 599 aaKnown RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 DLX2Q07687 328 aaPredicted RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 TSNAXIP1Q2TAA8 658 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 ZRANB3Q5FWF4 1079 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 FAM151BQ6UXP7 276 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 ZNF366Q8N895 744 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 SCG3Q8WXD2 468 aaKnown RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 SCRN2Q96FV2 425 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 SCYL1Q96KG9 808 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 MYADMQ96S97 322 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 TCF12Q99081 682 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 S1PR5Q9H228 398 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 P2RY12Q9H244 342 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 IL26Q9NPH9 171 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 PRRC2BQ5JSZ5 2229 aaKnown RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 A0A0G2JND7 137 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 H3BMM5 538 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 ZNF195O14628 629 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 APOA4P06727 396 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 KITP10721 976 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 PFKPQ01813 784 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 PTSQ03393 145 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 GIMAP7Q8NHV1 300 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 NAT14Q8WUY8 206 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 ZNF641Q96N77 438 aaPredicted RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 NSUN3Q9H649 340 aaKnown RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 ECT2Q9H8V3 914 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 OBP2AQ9NY56 170 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 PKP3Q9Y446 797 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 NEMP2A6NFY4 417 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 TRIM13O60858 407 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 CD1DP15813 335 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 ZNF37AP17032 561 aaPredicted RBP12.07□□□□□ -0.48
SDE2-201ENST00000272091 PMLP29590 882 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 CACNG1Q06432 222 aa12.07□□□□□ -0.48
SDE2-201ENST00000272091 LRRC66Q68CR7 880 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms