RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SUN2Q9UH99 717 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 GMNCA6NCL1 334 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 GSTA1P08263 222 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 SLC35E2BP0CK96 405 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 CHRM1P11229 460 aaPredicted RBP22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 CYP2A6P11509 494 aaPredicted RBP22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 STMN1P16949 149 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 SAT1P21673 171 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 VIPR1P32241 457 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 CTHP32929 405 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 GMPRP36959 345 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 PTPN5P54829 565 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 ZRANB3Q5FWF4 1079 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 HECTD2Q5U5R9 776 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 KYAT3Q6YP21 454 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 PARS2Q7L3T8 475 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 LPGAT1Q92604 370 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 EZH1Q92800 747 aaPredicted RBP22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 CDX2Q99626 313 aaPredicted RBP22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 KCNK12Q9HB15 430 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 PCDH12Q9NPG4 1184 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 ZDHHC4Q9NPG8 344 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 IL26Q9NPH9 171 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 CACNA2D2Q9NY47 1150 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 APPL1Q9UKG1 709 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 EMCNQ9ULC0 261 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 ANKRD6Q9Y2G4 727 aa22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 FNDC3AQ9Y2H6 1198 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-201ENST00000263121 SPECC1L-ADORA2AF8WAN1 911 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 K7EQS6 105 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 PHGDHO43175 533 aaKnown RBP22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 SRP72O76094 671 aaKnown RBP22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 C1SP09871 688 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 ZNF30P17039 623 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 NFKBIAP25963 317 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 CRABP2P29373 138 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 SPAM1P38567 509 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 TTPAP49638 278 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 IRF9Q00978 393 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 AARS2Q5JTZ9 985 aaKnown RBP22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 RNF187Q5TA31 235 aaPredicted RBP22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 ZNF549Q6P9A3 640 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 TXNDC11Q6PKC3 985 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 PLCD3Q8N3E9 789 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 SLC44A3Q8N4M1 653 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 PIP4K2CQ8TBX8 421 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 PBXIP1Q96AQ6 731 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 OLFM1Q99784 485 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 PHF7Q9BWX1 381 aaPredicted RBP22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 FAM96AQ9H5X1 160 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 PRSS16Q9NQE7 514 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 CRYL1Q9Y2S2 319 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 SLC30A1Q9Y6M5 507 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 KPNA3O00505 521 aaPredicted RBP22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 NPC1O15118 1278 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 ITGB7P26010 798 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 E2F5Q15329 346 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 PDK4Q16654 411 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 POM121L1PQ3SYA9 428 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 TAF1BQ53T94 588 aaPredicted RBP22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 FAM45BPQ6NSW5 357 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 FAM151BQ6UXP7 276 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 RAPH1Q70E73 1250 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 PLD6Q8N2A8 252 aaKnown RBP22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 FAM45AQ8TCE6 357 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 C1QTNF1Q9BXJ1 281 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 LIMD1Q9UGP4 676 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 TLK1Q9UKI8 766 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 VPS9D1Q9Y2B5 631 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 VWA7Q9Y334 891 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 STON1Q9Y6Q2 735 aa22.81■■□□□ 1.24
SMARCB1-201ENST00000263121 NDUFS3O75489 264 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 PRAMEF1O95521 474 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 EPHX1P07099 455 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 KIR2DL1P43626 348 aaPredicted RBP22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 PGGT1BP53609 377 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 SKIV2LQ15477 1246 aaKnown RBP22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 N4BP2L1Q5TBK1 243 aaPredicted RBP22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 RGS9BPQ6ZS82 235 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 DPPA4Q7L190 304 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 TTC7BQ86TV6 843 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 LCA5Q86VQ0 697 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 GPR26Q8NDV2 337 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 ARMC2Q8NEN0 867 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 DNASE1L2Q92874 299 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 ARRDC3Q96B67 414 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 TSPAN17Q96FV3 270 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 CHMP6Q96FZ7 201 aa22.8■■□□□ 1.24
SMARCB1-201ENST00000263121 TRBV5-4A0A0C4DH59 114 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 GLYATL1P3A0A0U1RQE8 302 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 PFDN6O15212 129 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 GPR39O43194 453 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 PLIN3O60664 434 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 COL6A2P12110 1019 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 SERPINB4P48594 390 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 METAP1P53582 386 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 SLC12A2P55011 1212 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 RALGDSQ12967 914 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 ARHGEF7Q14155 803 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 ZNF460Q14592 562 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms