RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ABCG4Q9H172 646 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 GNPTGQ9UJJ9 305 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 LRRC14BA6NHZ5 514 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 PDZK1P1A8MUH7 402 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 AP2A2O94973 939 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 AP2B1P63010 937 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 OTOAQ7RTW8 1153 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 TRMT11Q7Z4G4 463 aaKnown RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 ZC3HC1Q86WB0 502 aaKnown RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 C3orf58Q8NDZ4 430 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 TNIP2Q8NFZ5 429 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 MED8Q96G25 268 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 CASD1Q96PB1 797 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 DCTN4Q9UJW0 460 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 CAB39Q9Y376 341 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 ACADSP16219 412 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 CCL23P55773 120 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 BMPR2Q13873 1038 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 POU6F1Q14863 301 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 TRNP1Q6NT89 227 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 ZYG11AQ6WRX3 759 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 GPR62Q9BZJ7 368 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 NUDT4Q9NZJ9 180 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 TIMP1P01033 207 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 PGM1P36871 562 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 GAD2Q05329 585 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 KRT77Q7Z794 578 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 ACTRT2Q8TDY3 377 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 CLEC4CQ8WTT0 213 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 METTL2AQ96IZ6 378 aaKnown RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 MAGEE1Q9HCI5 957 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 PADI4Q9UM07 663 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 DNAJC16Q9Y2G8 782 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 POLR1DQ9Y2S0 133 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 ZFP37Q9Y6Q3 630 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 WDR47O94967 919 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 IGLV3-27P01718 113 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 RPN2P04844 631 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 C8AP07357 584 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 MSH3P20585 1137 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 AQP5P55064 265 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 PGS1Q32NB8 556 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 TRIM60Q495X7 471 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 KCTD11Q693B1 232 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 VPS37AQ8NEZ2 397 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 MYO19Q96H55 970 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 SERAC1Q96JX3 654 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 KLF6Q99612 283 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 TMEM120AQ9BXJ8 343 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 BCL2L14Q9BZR8 327 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 C1orf21Q9H246 121 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 AASDHPPTQ9NRN7 309 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 C1QTNF3-AMACRE9PGA6 284 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 NBNO60934 754 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 AOC2O75106 756 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 ARHGEF15O94989 841 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 RPL3P39023 403 aaKnown RBP8.21□□□□□ -1.09
PTPN3-201ENST00000262539 PRIM2P49643 509 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 CYB5D1Q6P9G0 228 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 CLNKQ7Z7G1 428 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 FBXO39Q8N4B4 442 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 GOLM1Q8NBJ4 401 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 LPCAT1Q8NF37 534 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 OSCP1Q8WVF1 389 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 PSMG2Q969U7 264 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 MLXIPLQ9NP71 852 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 ADAMTSL1Q8N6G6 1762 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 GOLGA8RI6L899 631 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 WBP4O75554 376 aaKnown RBP8.21□□□□□ -1.09
PTPN3-201ENST00000262539 UBOX5O94941 541 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 FCGR1AP12314 374 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 AMD1P17707 334 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 RPS3P23396 243 aaKnown RBP eCLIP8.21□□□□□ -1.09
PTPN3-201ENST00000262539 GABRR2P28476 465 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 PLEKHG6Q3KR16 790 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 FNBP1LQ5T0N5 605 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 AFMIDQ63HM1 303 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 LRRTM3Q86VH5 581 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 ARHGAP12Q8IWW6 846 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 OR2AP1Q8NGE2 309 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 ELMO3Q96BJ8 720 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 DEPDC7Q96QD5 511 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 C1QTNF7Q9BXJ2 289 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 OSER1Q9NX31 292 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 MKL2Q9ULH7 1088 aa8.21□□□□□ -1.09
PTPN3-201ENST00000262539 ZCWPW2A0A1B0GU75 182 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 MAN1A2O60476 641 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 VAV1P15498 845 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 PEX19P40855 299 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 CD86P42081 329 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 ACVR1Q04771 509 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 INPP5AQ14642 412 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 COQ5Q5HYK3 327 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 PIK3R6Q5UE93 754 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 CYP4V2Q6ZWL3 525 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-201ENST00000262539 ST13P4Q8IZP2 240 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-201ENST00000262539 MCOLN3Q8TDD5 553 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 PGLYRP2Q96PD5 576 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms