RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 LPAL2Q16609 132 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 CDKN3Q16667 212 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 ARMC3Q5W041 872 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 CAPN12Q6ZSI9 719 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 PTCD2Q8WV60 388 aaKnown RBP20.66■□□□□ 0.9
RTCA-201ENST00000260563 C1QTNF7Q9BXJ2 289 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 VPS37BQ9H9H4 285 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 FAM86C1Q9NVL1 165 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 SMG5Q9UPR3 1016 aaKnown RBP20.66■□□□□ 0.9
RTCA-201ENST00000260563 TCAF1Q9Y4C2 921 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 RALGAPA1Q6GYQ0 2036 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 HEATR9A2RTY3 570 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 SLC31A1O15431 190 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 ADRA1DP25100 572 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 SSTR1P30872 391 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 STC1P52823 247 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 PTSQ03393 145 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 FGL2Q14314 439 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 SLC29A2Q14542 456 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 UNC5AQ6ZN44 842 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 C3orf62Q6ZUJ4 267 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 TRIM56Q9BRZ2 755 aaKnown RBP20.65■□□□□ 0.9
RTCA-201ENST00000260563 KIFC1Q9BW19 673 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 C1QTNF2Q9BXJ5 285 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 MRM3Q9HC36 420 aaKnown RBP20.65■□□□□ 0.9
RTCA-201ENST00000260563 CHRAC1Q9NRG0 131 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 ZNF446Q9NWS9 450 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.65■□□□□ 0.91e-10■■■□□ 18
RTCA-201ENST00000260563 PKD2L2Q9NZM6 624 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 EIF2B4Q9UI10 523 aaKnown RBP20.65■□□□□ 0.9
RTCA-201ENST00000260563 DMTF1Q9Y222 760 aa20.65■□□□□ 0.9
RTCA-201ENST00000260563 FAM237BA0A1B0GVD1 139 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 SPAG6O75602 509 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 RECQL5O94762 991 aaPredicted RBP20.64■□□□□ 0.9
RTCA-201ENST00000260563 USP1O94782 785 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 CRTAMO95727 393 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 PAK4O96013 591 aaPredicted RBP20.64■□□□□ 0.9
RTCA-201ENST00000260563 POLBP06746 335 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 ABHD2P08910 425 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 HNRNPA2B1P22626 353 aaKnown RBP20.64■□□□□ 0.9
RTCA-201ENST00000260563 CD27P26842 260 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 PHBP35232 272 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 SEPT6Q14141 434 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 CYP2U1Q7Z449 544 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 HSD11B1LQ7Z5J1 315 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 BRSK1Q8TDC3 778 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 ASB12Q8WXK4 309 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 NUS1Q96E22 293 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 COQ10AQ96MF6 247 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 FUT8Q9BYC5 575 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 MIR1-1HGQ9H1L0 117 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 EBF2Q9HAK2 575 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 PLAC1Q9HBJ0 212 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 FZD3Q9NPG1 666 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 KCTD5Q9NXV2 234 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 RPS6KL1Q9Y6S9 549 aa20.64■□□□□ 0.9
RTCA-201ENST00000260563 SDK1Q7Z5N4 2213 aa20.64■□□□□ 0.89
RTCA-201ENST00000260563 ATXN2Q99700 1313 aaKnown RBP20.64■□□□□ 0.89
RTCA-201ENST00000260563 WNT9AO14904 365 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 AURKAO14965 403 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 GSTA2P09210 222 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 GM2AP17900 193 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 ITPKAP23677 461 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 AKT2P31751 481 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 HMGCLP35914 325 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 ETV3P41162 512 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 NBL1P41271 181 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 LAMB3Q13751 1172 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 AGERQ15109 404 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 TAF1AQ15573 450 aaPredicted RBP20.63■□□□□ 0.89
RTCA-201ENST00000260563 SPANXN3Q5MJ09 141 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 STEAP4Q687X5 459 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 TMEM135Q86UB9 458 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 RAVER1Q8IY67 606 aaKnown RBP20.63■□□□□ 0.89
RTCA-201ENST00000260563 DENND6BQ8NEG7 585 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 GSDMBQ8TAX9 411 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 DNASE2BQ8WZ79 361 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 DTD2Q96FN9 168 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 MYOCQ99972 504 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 ARL5AQ9Y689 179 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 A0A087WUV0 522 aaPredicted RBP20.63■□□□□ 0.89
RTCA-201ENST00000260563 GOLGA8CPA6NN73 597 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 C2orf81A6NN90 581 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 PRAMEF26H0Y7S4 382 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 NUDT17P0C025 328 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 MAOBP27338 520 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 DPP6P42658 865 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 PDE1BQ01064 536 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 CREB5Q02930 508 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 CRYMQ14894 314 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 CES3Q6UWW8 571 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 CBARPQ8N350 705 aaPredicted RBP20.63■□□□□ 0.89
RTCA-201ENST00000260563 TTC30BQ8N4P2 665 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 UHMK1Q8TAS1 419 aaKnown RBP20.63■□□□□ 0.89
RTCA-201ENST00000260563 ZNF669Q96BR6 464 aaPredicted RBP20.63■□□□□ 0.89
RTCA-201ENST00000260563 EID2BQ96D98 161 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 MFSD3Q96ES6 412 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 LOXL4Q96JB6 756 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 SERAC1Q96JX3 654 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 LENG8Q96PV6 779 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms