RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CTAGE3PQ8IX95 158 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 SIX5Q8N196 739 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 PPM1NQ8N819 430 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 C2CD4AQ8NCU7 369 aaPredicted RBP12.91□□□□□ -0.34
LSM8-201ENST00000249299 OR6P1Q8NGX9 317 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 ASB12Q8WXK4 309 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 EID2BQ96D98 161 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 TBATAQ96M53 351 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
LSM8-201ENST00000249299 MCMBPQ9BTE3 642 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 MKRN2Q9H000 416 aaKnown RBP12.91□□□□□ -0.34
LSM8-201ENST00000249299 TMBIM4Q9HC24 238 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 INTS10Q9NVR2 710 aaKnown RBP12.91□□□□□ -0.34
LSM8-201ENST00000249299 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
LSM8-201ENST00000249299 NDRG2Q9UN36 371 aaKnown RBP12.91□□□□□ -0.34
LSM8-201ENST00000249299 NCKAP1Q9Y2A7 1128 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 FADS3Q9Y5Q0 445 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 ACTL7BQ9Y614 415 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 MYO10Q9HD67 2058 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 CCDC162PA2VCL2 907 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 HMGB1P1B2RPK0 211 aaPredicted RBP12.9□□□□□ -0.34
LSM8-201ENST00000249299 MID1O15344 667 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 RGS16O15492 202 aaPredicted RBP12.9□□□□□ -0.34
LSM8-201ENST00000249299 GOT2P00505 430 aaKnown RBP12.9□□□□□ -0.34
LSM8-201ENST00000249299 PRKCGP05129 697 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 PYGLP06737 847 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 SNRPAP09012 282 aaKnown RBP12.9□□□□□ -0.34
LSM8-201ENST00000249299 ELFN1P0C7U0 828 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 BPIP17213 487 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 ITGALP20701 1170 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 CD72P21854 359 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 GCAP28676 217 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 LEPRP48357 1165 aaKnown RBP12.9□□□□□ -0.34
LSM8-201ENST00000249299 TTPAP49638 278 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 ARSDP51689 593 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 ADARP55265 1226 aaKnown RBP12.9□□□□□ -0.34
LSM8-201ENST00000249299 ZXDAP98168 799 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 XIAPP98170 497 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 CNTN1Q12860 1018 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 RALGDSQ12967 914 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 ITGA9Q13797 1035 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 TYSND1Q2T9J0 566 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 AGBL4Q5VU57 503 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 LIPIQ6XZB0 460 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 TIFABQ6ZNK6 161 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 CCDC91Q7Z6B0 441 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 TECPR1Q7Z6L1 1165 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 SPEM1Q8N4L4 309 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 AADATQ8N5Z0 425 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 PJA1Q8NG27 643 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 OR13C4Q8NGS5 318 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 OR2W6PQ8NHA6 318 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 UHMK1Q8TAS1 419 aaKnown RBP12.9□□□□□ -0.34
LSM8-201ENST00000249299 DCAKDQ8WVC6 231 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 MRGPRX1Q96LB2 322 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 OMDQ99983 421 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 CHRDQ9H2X0 955 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 TBC1D17Q9HA65 648 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 PREBQ9HCU5 417 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 IL26Q9NPH9 171 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 SMYD2Q9NRG4 433 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 CATSPERZQ9NTU4 200 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 SMOXQ9NWM0 555 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 FBXL12Q9NXK8 326 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 FBXO5Q9UKT4 447 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 KCTD3Q9Y597 815 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 SLC30A1Q9Y6M5 507 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 CKAP5Q14008 2032 aa12.9□□□□□ -0.34
LSM8-201ENST00000249299 TRBV5-4A0A0C4DH59 114 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 GLYATL1P3A0A0U1RQE8 302 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 CXorf49A8MYA2 514 aaPredicted RBP12.89□□□□□ -0.35
LSM8-201ENST00000249299 POC1B-GALNT4F8VUJ3 575 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 WNT9AO14904 365 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 GPR37O15354 613 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
LSM8-201ENST00000249299 SRP72O76094 671 aaKnown RBP12.89□□□□□ -0.35
LSM8-201ENST00000249299 ACADMP11310 421 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 FOXN2P32314 431 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 DPTQ07507 201 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 SIGLEC14Q08ET2 396 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 UBXN2BQ14CS0 331 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 FASTKD1Q53R41 847 aaKnown RBP12.89□□□□□ -0.35
LSM8-201ENST00000249299 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 ZNF470Q6ECI4 717 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 KIAA1161Q6NSJ0 714 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 PACS1Q6VY07 963 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 SNX20Q7Z614 316 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 TSPAN33Q86UF1 283 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 HDDC3Q8N4P3 179 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 CAMKK1Q8N5S9 505 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 EPS8L3Q8TE67 593 aaKnown RBP12.89□□□□□ -0.35
LSM8-201ENST00000249299 HEXDCQ8WVB3 486 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 ULK4Q96C45 1275 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 COQ10AQ96MF6 247 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 RBBP8Q99708 897 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 ZSCAN5AQ9BUG6 496 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 RHOJQ9H4E5 214 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 FAM83DQ9H4H8 585 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 ZDHHC4Q9NPG8 344 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms