RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 SETD3Q86TU7 594 aaPredicted RBP3.53□□□□□ -1.84
PHTF2-201ENST00000248550 DNAAF5Q86Y56 855 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 CCDC170Q8IYT3 715 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 CARFQ8N187 725 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 CISD2Q8N5K1 135 aaKnown RBP3.53□□□□□ -1.84
PHTF2-201ENST00000248550 LINC01465Q8N7H1 131 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 PNPLA1Q8N8W4 532 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 CCDC63Q8NA47 563 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 ZNF579Q8NAF0 562 aaKnown RBP3.53□□□□□ -1.84
PHTF2-201ENST00000248550 TMIEQ8NEW7 156 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 PROKR1Q8TCW9 393 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 DCAKDQ8WVC6 231 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 IPCEF1Q8WWN9 437 aaPredicted RBP3.53□□□□□ -1.84
PHTF2-201ENST00000248550 MTFMTQ96DP5 389 aaKnown RBP3.53□□□□□ -1.84
PHTF2-201ENST00000248550 RBM41Q96IZ5 413 aaKnown RBP3.53□□□□□ -1.84
PHTF2-201ENST00000248550 PLEKHG4BQ96PX9 1271 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 GPA33Q99795 319 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 CAPS2Q9BXY5 557 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 ZYG11BQ9C0D3 744 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 KATNBL1Q9H079 304 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 TP63Q9H3D4 680 aaPredicted RBP3.53□□□□□ -1.84
PHTF2-201ENST00000248550 PTGES2Q9H7Z7 377 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 DNAJC18Q9H819 358 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 CTTNBP2NLQ9P2B4 639 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 UTS2RQ9UKP6 389 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 PCOLCE2Q9UKZ9 415 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 KLF2Q9Y5W3 355 aaPredicted RBP3.53□□□□□ -1.84
PHTF2-201ENST00000248550 PTPRFP10586 1907 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 RLFQ13129 1914 aa3.53□□□□□ -1.84
PHTF2-201ENST00000248550 MYH8P13535 1937 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 GREB1LQ9C091 1923 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 DFFAO00273 331 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 EEF2KO00418 725 aaKnown RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 WNT9AO14904 365 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 ZNF185O15231 689 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 P4HA2O15460 535 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 MEFVO15553 781 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CLDN14O95500 239 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 NDST3O95803 873 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CXCL8P10145 99 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 TCF3P15923 654 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CCNFP41002 786 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 SLC19A1P41440 591 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 RANBP1P43487 201 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 POLE2P56282 527 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 PRAMEP78395 509 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 KCNA1Q09470 495 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 FCHO2Q0JRZ9 810 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 ADAM9Q13443 819 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 RFTN1Q14699 578 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 DEFB133Q30KQ1 61 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 FUT11Q495W5 492 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 FOXD4L5Q5VV16 416 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 OR2A2Q6IF42 318 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 HMBOX1Q6NT76 420 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 NLRP9Q7RTR0 991 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 WDR53Q7Z5U6 358 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CCDC25Q86WR0 208 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 LIX1LQ8IVB5 337 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 FBXL14Q8N1E6 418 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 SUMF1Q8NBK3 374 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 GATAD2BQ8WXI9 593 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 FOXD4L4Q8WXT5 416 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 GCDHQ92947 438 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 RAD51AP1Q96B01 352 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CLIC6Q96NY7 704 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 NUDCD1Q96RS6 583 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 RBM4Q9BWF3 364 aaKnown RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 MRPL1Q9BYD6 325 aaKnown RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 ANKHQ9HCJ1 492 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 INTS13Q9NVM9 706 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 EURLQ9NYK6 297 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CHORDC1Q9UHD1 332 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 ACSL5Q9ULC5 683 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 ZKSCAN5Q9Y2L8 839 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 GRIN2DO15399 1336 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 WASHC1A8K0Z3 465 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 ARHGEF33A8MVX0 844 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 WASH3PC4AMC7 463 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 RTCAO00442 366 aaKnown RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CYP1A1P04798 512 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CYP17A1P05093 508 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 ABCB1P08183 1280 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 RBP3P10745 1247 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 NR2C1P13056 603 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 EDN3P14138 238 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 GLB1P16278 677 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 RPS6KB1P23443 525 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 TNFSF4P23510 183 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 HTR1EP28566 365 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 LRPAP1P30533 357 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 SHMT2P34897 504 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 GEMP55040 296 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 HNRNPA1L2Q32P51 320 aaKnown RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 CLLU1OSQ5K130 101 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 WASH2PQ6VEQ5 465 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 GSTA5Q7RTV2 222 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 KIAA0907Q7Z7F0 614 aaPredicted RBP3.52□□□□□ -1.85
PHTF2-201ENST00000248550 GLRX5Q86SX6 157 aa3.52□□□□□ -1.85
PHTF2-201ENST00000248550 LRRTM4Q86VH4 590 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms