RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ZFAND2BQ8WV99 257 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 SKA2Q8WVK7 121 aaPredicted RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 SUSD3Q96L08 255 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 HGH1Q9BTY7 390 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 ERVK-6Q9BXR3 956 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 TLR8Q9NR97 1041 aaKnown RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 SMPD4Q9NXE4 827 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 C7orf72A4D263 438 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 CDC7O00311 574 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 STX7O15400 261 aaKnown RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 RABL3Q5HYI8 236 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 CLVS1Q8IUQ0 354 aaPredicted RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 OR2T34Q8NGX1 318 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 OR2T3Q8NH03 318 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 BTN2A3PQ96KV6 586 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 CDK15Q96Q40 435 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 EGFL8Q99944 293 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 APOL5Q9BWW9 433 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 NOL6Q9H6R4 1146 aaKnown RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 PFDN4Q9NQP4 134 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 SUCOQ9UBS9 1254 aaKnown RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 TLR6Q9Y2C9 796 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 PRSS51A0A1B0GVH4 220 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 ACOT8O14734 319 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 PCNAP12004 261 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 NFKBIAP25963 317 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 AGTR2P50052 363 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 RPS24P62847 133 aaKnown RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 CLCQ05315 142 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 OR4D1Q15615 310 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 ZIK1Q3SY52 487 aaPredicted RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 LRRC49Q8IUZ0 686 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 STAG3L4Q8TBR4 150 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 MAGEE2Q8TD90 523 aaPredicted RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 KCTD14Q9BQ13 255 aaPredicted RBP12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 TRMOQ9BU70 441 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 MFSD1Q9H3U5 465 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 MEAF6Q9HAF1 191 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 CROCCQ5TZA2 2017 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 A8MX80 341 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 DENRO43583 198 aaKnown RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 SYNCRIPO60506 623 aaKnown RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 ALDOCP09972 364 aaKnown RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 ELNP15502 786 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 ATP6V1B2P21281 511 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 LPIN1Q14693 890 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 LINGO4Q6UY18 593 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 TMIGD2Q96BF3 282 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 RNF145Q96MT1 663 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 TMEM74Q96NL1 305 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 OSBPL11Q9BXB4 747 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 SYTL2Q9HCH5 934 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 OTOFQ9HC10 1997 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 GOLGA4Q13439 2230 aaKnown RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 C2orf81A6NN90 581 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 RPP40O75818 363 aaKnown RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 PIK3CGP48736 1102 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 FLT3LGP49771 235 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 OXCT1P55809 520 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 IL1RL1Q01638 556 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 LRP8Q14114 963 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 MSANTD2Q6P1R3 559 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 RALGPS2Q86X27 583 aaPredicted RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 AHI1Q8N157 1196 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 SOX17Q9H6I2 414 aaPredicted RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 ZFYVE28Q9HCC9 887 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 MRGBPQ9NV56 204 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 ZMYM5Q9UJ78 669 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 NIPSNAP2O75323 286 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 PYGLP06737 847 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 SMIM18P0DKX4 95 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 SLC7A1P30825 629 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 NDST2P52849 883 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 RFTN1Q14699 578 aaPredicted RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 CHSY3Q70JA7 882 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 SERINC5Q86VE9 423 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 RETREG3Q86VR2 466 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 DENND1CQ8IV53 801 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 METTL25Q8N6Q8 603 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 KLHDC9Q8NEP7 349 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 PRICKLE1Q96MT3 831 aaPredicted RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 ARHGAP39Q9C0H5 1083 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 SCUBE2Q9NQ36 999 aa12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 AFF4Q9UHB7 1163 aaKnown RBP12.57□□□□□ -0.4
RAB3IP-201ENST00000247833 CCDC154A6NI56 674 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 PFDN6O15212 129 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 CLOCKO15516 846 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 VPS26AO75436 327 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 FGF1P05230 155 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 PLCL1Q15111 1095 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 PTPRRQ15256 657 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 OR6K2Q8NGY2 324 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 RIN3Q8TB24 985 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 TCF12Q99081 682 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 ING2Q9H160 280 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 LRFN2Q9ULH4 789 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 GNGT2O14610 69 aa12.56□□□□□ -0.4
RAB3IP-201ENST00000247833 GSTA4O15217 222 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms