RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ZDHHC20Q5W0Z9 365 aa18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 LRRC66Q68CR7 880 aa18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 CCDC91Q7Z6B0 441 aa18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 TBC1D1Q86TI0 1168 aaPredicted RBP18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 TTC7BQ86TV6 843 aa18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 ZNF473Q8WTR7 871 aaKnown RBP18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 VOPP1Q96AW1 172 aa18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 EID2BQ96D98 161 aa18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 MCCC1Q96RQ3 725 aaPredicted RBP18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 MANSC1Q9H8J5 431 aa18.68■□□□□ 0.58
TNFSF9-201ENST00000245817 ANHXE9PGG2 379 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 TOP3BO95985 862 aaKnown RBP18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 CTSLP07711 333 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 HLA-EP13747 358 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 TAC1P20366 129 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 ITGALP20701 1170 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 SPAM1P38567 509 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 KPNA2P52292 529 aaKnown RBP18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 IRX4P78413 519 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 HTR4Q13639 388 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 CDKN3Q16667 212 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 RBM20Q5T481 1227 aaKnown RBP18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 NAIF1Q69YI7 327 aaPredicted RBP18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 C16orf46Q6P387 395 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 FAM151BQ6UXP7 276 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 CERS6Q6ZMG9 384 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 RGS9BPQ6ZS82 235 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 TSPAN33Q86UF1 283 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 NUDCD3Q8IVD9 361 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 STK40Q8N2I9 435 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 CBARPQ8N350 705 aaPredicted RBP18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 ZNF75CPQ92670 426 aaPredicted RBP18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 FAM96AQ9H5X1 160 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 DKK3Q9UBP4 350 aa18.67■□□□□ 0.58
TNFSF9-201ENST00000245817 UPK3BL1B0FP48 263 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 UPK3BL2E5RIL1 263 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 KPNA3O00505 521 aaPredicted RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 BIRC5O15392 142 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PLIN3O60664 434 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 SRP72O76094 671 aaKnown RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PRAMEF1O95521 474 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 APOA4P06727 396 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 SLC35E2BP0CK96 405 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 ZNF30P17039 623 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 DRD4P21917 467 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 XIAPP98170 497 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 IRF9Q00978 393 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 ZKSCAN8Q15776 578 aaPredicted RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 ERAP2Q6P179 960 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 DSG4Q86SJ6 1040 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 CEP97Q8IW35 865 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PNPLA1Q8N8W4 532 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 CHFRQ96EP1 664 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PITPNM3Q9BZ71 974 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 GPAMQ9HCL2 828 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PKD2L2Q9NZM6 624 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 TMEM216Q9P0N5 145 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 THAP10Q9P2Z0 257 aaPredicted RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 B4GALT6Q9UBX8 382 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 MID2Q9UJV3 735 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 RUVBL2Q9Y230 463 aaKnown RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 DOCK8Q8NF50 2099 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 GLYATL1P3A0A0U1RQE8 302 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 TSPAN11A1L157 253 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 C16orf96A6NNT2 1141 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 ARNTLO00327 626 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PRSS56P0CW18 603 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 BMP1P13497 986 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 BPIP17213 487 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 VIPR1P32241 457 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 ELAVL3Q14576 367 aaKnown RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 TSNAXIP1Q2TAA8 658 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 C9orf64Q5T6V5 341 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 GKAP1Q5VSY0 366 aaPredicted RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 LYPLAL1Q5VWZ2 237 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 ATG16L1Q676U5 607 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PSAPL1Q6NUJ1 521 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 SNX20Q7Z614 316 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 CLEC14AQ86T13 490 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 TMIEQ8NEW7 156 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PPP1R14CQ8TAE6 165 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 SREK1Q8WXA9 508 aaKnown RBP18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 PPP1R16AQ96I34 528 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 SCYL1Q96KG9 808 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 TMEM245Q9H330 911 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 ASB8Q9H765 288 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 NMRAL1Q9HBL8 299 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 DYRK4Q9NR20 520 aa18.66■□□□□ 0.58
TNFSF9-201ENST00000245817 COL6A3P12111 3177 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 PROCP04070 461 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 EPHX1P07099 455 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 TIMP2P16035 220 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 FMO4P31512 558 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 PTGER3P43115 390 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 CDKN1CP49918 316 aaPredicted RBP18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 SEMG2Q02383 582 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 PTSQ03393 145 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 ZNF460Q14592 562 aa18.65■□□□□ 0.58
TNFSF9-201ENST00000245817 DBN1Q16643 649 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms