RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CDKN2AIPNLQ96HQ2 116 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 VN1R3Q9BXE9 311 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 NACA2Q9H009 215 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 EPS15L1Q9UBC2 864 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 SPO11Q9Y5K1 396 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 UBFD1O14562 309 aaKnown RBP21.88■■□□□ 1.09
RNF39-201ENST00000244360 CAPNS1P04632 268 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 OR1D2P34982 312 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 HERVK_113P63132 956 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 TLR1Q15399 786 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 RPS27LQ71UM5 84 aaKnown RBP21.88■■□□□ 1.09
RNF39-201ENST00000244360 ERVK-6Q9BXR3 956 aa21.88■■□□□ 1.09
RNF39-201ENST00000244360 CNOT11Q9UKZ1 510 aaKnown RBP21.88■■□□□ 1.09
RNF39-201ENST00000244360 PRSS51A0A1B0GVH4 220 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 TRIM38O00635 465 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 INSIG1O15503 277 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 DNAJA2O60884 412 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 STC2O76061 302 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 SLC4A1P02730 911 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 RPL17P18621 184 aaKnown RBP21.87■■□□□ 1.09
RNF39-201ENST00000244360 GRIA2P42262 883 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 UNC50Q53HI1 259 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 RHEBL1Q8TAI7 183 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 TOP1MTQ969P6 601 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 ZFRQ96KR1 1074 aaKnown RBP21.87■■□□□ 1.09
RNF39-201ENST00000244360 SPON2Q9BUD6 331 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 AFF4Q9UHB7 1163 aaKnown RBP21.87■■□□□ 1.09
RNF39-201ENST00000244360 TRAF6Q9Y4K3 522 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 CFLARO15519 480 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 CXCL10P02778 98 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 CES1P23141 567 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 PMLP29590 882 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 PSMD8P48556 350 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 SQLEQ14534 574 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 AHI1Q8N157 1196 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 HMGCLL1Q8TB92 370 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 MYRFLQ96LU7 910 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 TDRD1Q9BXT4 1180 aaKnown RBP21.87■■□□□ 1.09
RNF39-201ENST00000244360 MRPL1Q9BYD6 325 aaKnown RBP21.87■■□□□ 1.09
RNF39-201ENST00000244360 HSFX1Q9UBD0 423 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 PACSIN3Q9UKS6 424 aa21.87■■□□□ 1.09
RNF39-201ENST00000244360 A0A1B0GVM2 712 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 SEC24AO95486 1093 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 PRLP01236 227 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 RHOCP08134 193 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 CORO1AP31146 461 aaKnown RBP21.86■■□□□ 1.09
RNF39-201ENST00000244360 RPL5P46777 297 aaKnown RBP21.86■■□□□ 1.09
RNF39-201ENST00000244360 SGSHP51688 502 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 TAF1AQ15573 450 aaPredicted RBP21.86■■□□□ 1.09
RNF39-201ENST00000244360 AFTPHQ6ULP2 937 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 CYHR1Q6ZMK1 362 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 DTNBP1Q96EV8 351 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 SUCOQ9UBS9 1254 aaKnown RBP21.86■■□□□ 1.09
RNF39-201ENST00000244360 TNFAIP8O95379 198 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 F11P03951 625 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 SMIM18P0DKX4 95 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 PKNOX1P55347 436 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 STX5Q13190 355 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 PTK2BQ14289 1009 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 CYTH1Q15438 398 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 LPGAT1Q92604 370 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 ASB9Q96DX5 294 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 MRPS26Q9BYN8 205 aaKnown RBP21.86■■□□□ 1.09
RNF39-201ENST00000244360 TFB2MQ9H5Q4 396 aaKnown RBP21.86■■□□□ 1.09
RNF39-201ENST00000244360 FIS1Q9Y3D6 152 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 AP4B1Q9Y6B7 739 aa21.86■■□□□ 1.09
RNF39-201ENST00000244360 ANKRD36A6QL64 1941 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.85■■□□□ 1.09
RNF39-201ENST00000244360 ACOT8O14734 319 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 DPP6P42658 865 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 ZNF177Q13360 481 aaPredicted RBP21.85■■□□□ 1.09
RNF39-201ENST00000244360 LSAMPQ13449 338 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 OR4D1Q15615 310 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 USP13Q92995 863 aaPredicted RBP21.85■■□□□ 1.09
RNF39-201ENST00000244360 ASB2Q96Q27 587 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 ATOH8Q96SQ7 321 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 TCF12Q99081 682 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 ZNF696Q9H7X3 374 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 COPS7BQ9H9Q2 264 aaPredicted RBP21.85■■□□□ 1.09
RNF39-201ENST00000244360 AGO1Q9UL18 857 aaKnown RBP21.85■■□□□ 1.09
RNF39-201ENST00000244360 TANC1Q9C0D5 1861 aa21.85■■□□□ 1.09
RNF39-201ENST00000244360 UBDO15205 165 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 SUPT7LO94864 414 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 MTHFD2P13995 350 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 ALDH7A1P49419 539 aaKnown RBP21.84■■□□□ 1.09
RNF39-201ENST00000244360 SCNN1BP51168 640 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 MS4A2Q01362 244 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 DEFB115Q30KQ5 88 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 ADGRF1Q5T601 910 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 CLSTN3Q9BQT9 956 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 SCUBE2Q9NQ36 999 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 TRPM5Q9NZQ8 1165 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 MED16Q9Y2X0 877 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 SCN5AQ14524 2016 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 H3BMM5 538 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 ABLIM3O94929 683 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 MAP7Q14244 749 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 UGT3A2Q3SY77 523 aa21.84■■□□□ 1.09
RNF39-201ENST00000244360 CXorf57Q6NSI4 855 aaKnown RBP21.84■■□□□ 1.09
RNF39-201ENST00000244360 GK5Q6ZS86 529 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms