RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 UBA6A0AVT1 1052 aaPredicted RBP13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 GPR39O43194 453 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 OR1I1O60431 355 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 H2AFYO75367 372 aaKnown RBP13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 NDUFS3O75489 264 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 CLDN7O95471 211 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 KCNA5P22460 613 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 CA5AP35218 305 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 MAGEA9P43362 315 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 CCR10P46092 362 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 ACCSLQ4AC99 568 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 ZRANB3Q5FWF4 1079 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 Q6ZVU0 165 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 CLNKQ7Z7G1 428 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 ISCA2Q86U28 154 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 C12orf40Q86WS4 652 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 TXNDC5Q8NBS9 432 aaKnown RBP13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 OR2A12Q8NGT7 310 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 FRS2Q8WU20 508 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 SORCS1Q8WY21 1168 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 ASB16Q96NS5 453 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 EBF4Q9BQW3 602 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 DRC3Q9H069 523 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 ZFP69BQ9UJL9 534 aa13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 NUP210Q8TEM1 1887 aaPredicted RBP13.72□□□□□ -0.21
SNRNP27-201ENST00000244227 C1orf232A0A0U1RR37 186 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 NEMP2A6NFY4 417 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 WASH3PC4AMC7 463 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 RFXAPO00287 272 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 BNIP3LO60238 219 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 POP4O95707 220 aaKnown RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 CD1DP15813 335 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 ALOX15P16050 662 aaPredicted RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 ZNF37AP17032 561 aaPredicted RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 TTPAP49638 278 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 KPNA2P52292 529 aaKnown RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 NAGLUP54802 743 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 TUBB3Q13509 450 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 CTSL3PQ5NE16 218 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 TSPAN33Q86UF1 283 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 PLPP6Q8IY26 295 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 LSMEM2Q8N112 164 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 ZNF781Q8N8C0 355 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 GRIN3AQ8TCU5 1115 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 PPP4R1Q8TF05 950 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 CYB5D2Q8WUJ1 264 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 SREK1Q8WXA9 508 aaKnown RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 PTERQ96BW5 349 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 SIKE1Q9BRV8 207 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 GALPQ9UBC7 116 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 FNDC3AQ9Y2H6 1198 aaKnown RBP13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 TRANK1O15050 2925 aa13.71□□□□□ -0.21
SNRNP27-201ENST00000244227 NPIPB15A6NHN6 443 aaPredicted RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 HOXC11O43248 304 aaPredicted RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 SRP72O76094 671 aaKnown RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 RHOBTB1O94844 696 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 UNC5CO95185 931 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 CHRNGP07510 517 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 RBP1P09455 135 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 ADH5P11766 374 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 POLR2EP19388 210 aaKnown RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 TFEBP19484 476 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 FSHRP23945 695 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 ATP5F1P24539 256 aaPredicted RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 SKIV2L2P42285 1042 aaKnown RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 DNAJB13P59910 316 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 SEMG2Q02383 582 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 CACNG1Q06432 222 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 PTPRNQ16849 979 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 GAB4Q2WGN9 574 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 RARS2Q5T160 578 aaKnown RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 CRTC1Q6UUV9 634 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 ASRGL1Q7L266 308 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 TTC7BQ86TV6 843 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 WDR75Q8IWA0 830 aaKnown RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 C10orf67Q8IYJ2 551 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 FGF13Q92913 245 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 SMARCD2Q92925 531 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 FAM136AQ96C01 138 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 SCRN2Q96FV2 425 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 ZNF641Q96N77 438 aaPredicted RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 MCCC1Q96RQ3 725 aaPredicted RBP13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 WWP1Q9H0M0 922 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 ZDHHC6Q9H6R6 413 aa13.71□□□□□ -0.22
SNRNP27-201ENST00000244227 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 OTOL1A6NHN0 477 aaPredicted RBP13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 A8MX80 341 aa13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 TTC34A8MYJ7 566 aa13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 H3BMM5 538 aa13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 ZBTB14O43829 449 aa13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 HSPA4LO95757 839 aa13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 PKMP14618 531 aaKnown RBP13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 ARSAP15289 507 aa13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 BPIP17213 487 aa13.7□□□□□ -0.22
SNRNP27-201ENST00000244227 CD9P21926 228 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms